Gene
| Gene Model ID | pfu_aug1.0_5106.1_38061 |
|---|---|
| Locus | scaffold5106.1 : 10076 ... 13948 : + |
| To GenomeBrowser | scaffold5106.1:10076..13948 |
| Genes list of scaffold | scaffold5106.1 |
| Synonym | pfu_aug2.0_666.1_21042 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5106.1_38061.t1 | 2 | 1 | DUF1126 | 117 | 148 | 9.6e-32 | 108.1 | 3.8e-20 | 2.8e-16 | 58.6 |
| pfu_aug1.0_5106.1_38061.t1 | 2 | 2 | DUF1126 | 260 | 293 | 9.6e-32 | 108.1 | 1.3e-16 | 9.6e-13 | 47.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5106.1_38061.t1 | gi|291239668|ref|XP_002739739.1| | PREDICTED: EF-hand domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5106.1_38061.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5106.1_38061.t1 atggagggactgccgtttctccctgggaatagcttcagagatccgaccgtagggaaatatcacagaagtcattcactgaa ctacaagaatggttatgctgtacctaaactccctgaagttggtataggcggaaaaccaattgtttataaccaactgtctg aacaggaactcgacgagcttgcaaatttcaatccaactcttacatatgggcaagccaaacaggcccctccagaggacttt gtaccaggacatgtagcatgggacaagaaggttcttaaattcaatgcgtttttcaaacaaacagtccatgagtcaccaga tgaatattatagagtgcgtccagttgacattttctattatctggaagatgacagcatatctgtagtggaaccacatgtag aaaacagtggcatgcctcaaggaaaattgatcaagcgacagagactgccaaagaatgaccagggggataactggcattgg aaggacattaacaacggtgtcaatgttacgttctatggaaaaatctttcacattgtcaactgtgatgaatttacaaagaa tttcttggaaagtgagggtcttgatgtgaatccgtctgagggtctccctacagacccatacatagagagaaggaaagagg ctgccgcacttaggacgtacaacactccctcatcattcgacaaactcaaacaattcatggaactcgatcgtaaagtgcta agattctactgtgtatgggatgatagggacaacatgtttggtgaaatgagaccatttgttatacattattatttggtaga tgacacattagaggttcgcgaggttcataaagctaatgatggccgtgatcccttcccagttttgatcggcagacacaagg tccccaaggatagatacaaagtagaatcactttaa |
|
Protein
| Protein ID | pfu_aug1.0_5106.1_38061.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5106.1_38061.t1 MEGLPFLPGNSFRDPTVGKYHRSHSLNYKNGYAVPKLPEVGIGGKPIVYNQLSEQELDELANFNPTLTYGQAKQAPPEDF VPGHVAWDKKVLKFNAFFKQTVHESPDEYYRVRPVDIFYYLEDDSISVVEPHVENSGMPQGKLIKRQRLPKNDQGDNWHW KDINNGVNVTFYGKIFHIVNCDEFTKNFLESEGLDVNPSEGLPTDPYIERRKEAAALRTYNTPSSFDKLKQFMELDRKVL RFYCVWDDRDNMFGEMRPFVIHYYLVDDTLEVREVHKANDGRDPFPVLIGRHKVPKDRYKVESL |
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