Gene
| Gene Model ID | pfu_aug1.0_5106.1_38064 |
|---|---|
| Locus | scaffold5106.1 : 21213 ... 34865 : - |
| To GenomeBrowser | scaffold5106.1:21213..34865 |
| Genes list of scaffold | scaffold5106.1 |
| Synonym | pfu_aug2.0_666.1_21041 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5106.1_38064.t1 | 1 | 1 | zf-RING_2 | 103 | 146 | 1.3e-12 | 47.2 | 1.5e-15 | 1.3e-12 | 47.2 |
| pfu_aug1.0_5106.1_38064.t1 | 1 | 1 | zf-RING_5 | 104 | 146 | 1.1e-06 | 28.3 | 1.1e-09 | 1.1e-06 | 28.3 |
| pfu_aug1.0_5106.1_38064.t1 | 1 | 1 | zf-C3HC4_2 | 104 | 145 | 1.3e-06 | 28.2 | 1.4e-09 | 1.3e-06 | 28.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5106.1_38064.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5106.1_38064.t1 atggagaactacacttgctgtttcgttctagtttttctgttattggcatcgatatttacggtgtttgcaatatctttaaa gacaagtagtgtgatagacgatgaccacaacaacacggtgtttgttgttctatcgatgacgttactctccgtgtgtatgg tgtgtactattgtgtgtggtgttgcatgtagacagtcacttcaagagacagatggaagaaaggggagagtatctagaggg gctctatatgtagtgtccaccattggtatgacaggaaaactgactttgttgaagcaaaaaggtacggactgcccaatatg ctgggaagagctcacttcggacagccaagccaaactgagctgtaaccatgtttttcacaagaagtgtattgatttacact tcaaagtcaattctccgttatcatgtccctactgtagagccacaccccttgtattcccaggaccggagagaataaagtcg gatatccgattggtggcattttggatatcctcctcctttcgttgccatgggcgacaacctccggacaacgcccagcctga gtgggtgtga |
|
Protein
| Protein ID | pfu_aug1.0_5106.1_38064.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5106.1_38064.t1 MENYTCCFVLVFLLLASIFTVFAISLKTSSVIDDDHNNTVFVVLSMTLLSVCMVCTIVCGVACRQSLQETDGRKGRVSRG ALYVVSTIGMTGKLTLLKQKGTDCPICWEELTSDSQAKLSCNHVFHKKCIDLHFKVNSPLSCPYCRATPLVFPGPERIKS DIRLVAFWISSSFRCHGRQPPDNAQPEWV |
|