Gene
| Gene Model ID | pfu_aug1.0_5111.1_67166 |
|---|---|
| Locus | scaffold5111.1 : 48910 ... 60425 : - |
| To GenomeBrowser | scaffold5111.1:48910..60425 |
| Genes list of scaffold | scaffold5111.1 |
| Synonym | pfu_aug2.0_48.1_26735 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5111.1_67166.t1 | 1 | 1 | Flavodoxin_2 | 10 | 219 | 5.4006e-42 | 143.5 | 1.4013e-45 | 6.60012e-42 | 143.2 |
| pfu_aug1.0_5111.1_67166.t1 | 1 | 1 | FMN_red | 10 | 160 | 1.0e-11 | 44.5 | 3.0e-15 | 1.5e-11 | 44.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5111.1_67166.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5111.1_67166.t1 atgatgagctcgggttccagaccacgacgagtcttgattgtattcgcccatcccgacaagcgctcctttaatggtgctct gctacaaacagctatacacagcctagagagtaagggatgtcaagtcgaggtatcagacctccatcaacagaacttcgatc ctagggacaatataagtgacgtaaaactggatacagataatgatgtagcattcaactatagtgttgaaagtggaaaagca tacaggtcaggcaaactgtccgaagaaagaaacacagagattgataaagtgaaacgtgccgatctggtggtgttccagtt ccctttgtactggtcagctgctccggccatcttaaaaggatggatggacaaagtgcttatcgatggattcgctgctgatt tcgagaaagggaaaattttagataaaggtcttatgaaggataaaactgctgtcttgtcaataactacaggtggtagtaga gcgaccttatcgtctttcggtctttttggggatataaacgtcttactatggccattacagtatggaactttgcgcatgtg tggttttaatgttctaagacctcaactttcttgtgaaacattatttgtaagtgaagacaaaagaaaggaatatctagcaa gctgggagagcagactttgtagtatatttgatgaggaaccattgtcttttccatctgttaatgaatttgataccaaagaa acatggacactaacagaggagtctagagaaaagtatagtaagagtggaacaataccctcggttgttcatcacatgggaac gctcgatgtaggacaaacatttgaaattaagaagacaggtgattag |
|
Protein
| Protein ID | pfu_aug1.0_5111.1_67166.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5111.1_67166.t1 MMSSGSRPRRVLIVFAHPDKRSFNGALLQTAIHSLESKGCQVEVSDLHQQNFDPRDNISDVKLDTDNDVAFNYSVESGKA YRSGKLSEERNTEIDKVKRADLVVFQFPLYWSAAPAILKGWMDKVLIDGFAADFEKGKILDKGLMKDKTAVLSITTGGSR ATLSSFGLFGDINVLLWPLQYGTLRMCGFNVLRPQLSCETLFVSEDKRKEYLASWESRLCSIFDEEPLSFPSVNEFDTKE TWTLTEESREKYSKSGTIPSVVHHMGTLDVGQTFEIKKTGD |
|