Gene
| Gene Model ID | pfu_aug1.0_51144.1_12731 |
|---|---|
| Locus | scaffold51144.1 : 536 ... 13042 : + |
| To GenomeBrowser | scaffold51144.1:536..13042 |
| Genes list of scaffold | scaffold51144.1 |
| Synonym | pfu_aug2.0_720.1_01078 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_51144.1_12731.t1 | 5 | 1 | LRR_8 | 94 | 150 | 1.3e-11 | 44.0 | 1.3e-12 | 4.8e-09 | 35.8 |
| pfu_aug1.0_51144.1_12731.t1 | 5 | 2 | LRR_8 | 161 | 190 | 1.3e-11 | 44.0 | 4.3e-05 | 0.16 | 11.7 |
| pfu_aug1.0_51144.1_12731.t1 | 5 | 3 | LRR_8 | 218 | 238 | 1.3e-11 | 44.0 | 0.14 | 540.0 | 0.4 |
| pfu_aug1.0_51144.1_12731.t1 | 5 | 4 | LRR_8 | 286 | 297 | 1.3e-11 | 44.0 | 0.041 | 150.0 | 2.2 |
| pfu_aug1.0_51144.1_12731.t1 | 5 | 5 | LRR_8 | 287 | 297 | 1.3e-11 | 44.0 | 0.077 | 290.0 | 1.3 |
Transcript
| Transcript ID | pfu_aug1.0_51144.1_12731.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_51144.1_12731.t1 atgacgtcgcagtataacggttacgtggagtcctactttgacgtcggggtaggtcatgaaaattttaaaggtcaacaatt acaacgaaaccgtaacaaaatagttctcggcaaattcggcctcatcccctacgcatttacacacctactttcagtaggaa ggactacacatggcatttgctctgactgttcaagagttcctattcctgatactttacacacatacgattgttccaaatgc ggtttaccagaggtgccgacttttcccaatacatctcgtgttattctactgtcttacaacaaaatatcggcgattagaag ggaatccttccagtggctgtcggacttacgggatcttagtctagaatttaatgaaattcgccaagtagagagcgattctt tccatgatttgaattcaatgataaaattgaatatttcctggaataaactcaagagtcttgatgatctagaaatgccatca agtctccagtccctcgacattcggatgaattactatacgaagtatccagattcaatacagaacttgacacagttaagagt tttaaatatcgatattttcaccggtttttacttcgaccaaaattttctttcacttaccaatttgtcaattattactttca atccaagaagtgtcttttcgttgaaaaatgatacgtttgaaggattgggagattcacctctggaggaaataaacattgat tttaaaggtcacgtgagaaaaccaattgaaatagattttctgaaacccttccgattcctgaaacgattaagaatcagtat ggacggattgtttgatgtaagtgacatcctaaaggtcctccatgggttacgttacaggtcattagaaaagatggatataa gtggaaacaattggatctctcggagaatacattttcttcgaaaagagaacctcggtaatcttttgacaataacgtcaagt aacaatcaactgacgttgctggtgtatgtgcagtcttttgtttgtctcctggaactgggcttcgaattctgtagcagttc tatgcatgcgagctcatatggtgttgcataa |
|
Protein
| Protein ID | pfu_aug1.0_51144.1_12731.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_51144.1_12731.t1 MTSQYNGYVESYFDVGVGHENFKGQQLQRNRNKIVLGKFGLIPYAFTHLLSVGRTTHGICSDCSRVPIPDTLHTYDCSKC GLPEVPTFPNTSRVILLSYNKISAIRRESFQWLSDLRDLSLEFNEIRQVESDSFHDLNSMIKLNISWNKLKSLDDLEMPS SLQSLDIRMNYYTKYPDSIQNLTQLRVLNIDIFTGFYFDQNFLSLTNLSIITFNPRSVFSLKNDTFEGLGDSPLEEINID FKGHVRKPIEIDFLKPFRFLKRLRISMDGLFDVSDILKVLHGLRYRSLEKMDISGNNWISRRIHFLRKENLGNLLTITSS NNQLTLLVYVQSFVCLLELGFEFCSSSMHASSYGVA |
|