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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5122.1_59706
Locus scaffold5122.1 : 6076 ... 11643 : +
To GenomeBrowser scaffold5122.1:6076..11643
Genes list of scaffold scaffold5122.1
Synonym pfu_aug2.0_2673.1_12251

Manual annotation
Study fieldBiomineralization
Gene nameKRMP-4
Descriptionreciplocal BLASTP best hit to NCBI Accession AB507428the CDS also exist in pfu_aug1.0_229418.1_28682.t1, pfu_aug1.0_265660.1_50281.t1
mRNA evidence

Study fieldBiomineralization
Gene name
Descriptionthe CDS also exist in pfu_aug1.0_229418.1_28682.t1, pfu_aug1.0_265660.1_50281.t1
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5122.1_59706.t1 gi|239914090|dbj|BAH78730.1| lysine-rich matrix protein 4 [Pinctada fucata] 0.0

Transcript
Transcript IDpfu_aug1.0_5122.1_59706.t1
Definition-
>pfu_aug1.0_5122.1_59706.t1
atgaagttcgccgcagttttgaccgttttcctcctacttggagcattcagtgccgatggatactggtttaagcataggag
gcctaatgtaagtatctgttggtgggagttcaattggtgccagcagaaatgtcacccttgggattggatatgcaaacaga
aatgtttttgggagtacaaatggtgcctacataaaattggtggacattatccgtatggtggttatggtggtggatccagt
ggtggatatgggttcgatggatatggtggtgacgattacaactttggctatggtcatcgtaaatacaaatattaa

Protein
Protein IDpfu_aug1.0_5122.1_59706.t1
Definition-
>pfu_aug1.0_5122.1_59706.t1
MKFAAVLTVFLLLGAFSADGYWFKHRRPNVSICWWEFNWCQQKCHPWDWICKQKCFWEYKWCLHKIGGHYPYGGYGGGSS
GGYGFDGYGGDDYNFGYGHRKYKY

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