Gene
| Gene Model ID | pfu_aug1.0_5137.1_67174 |
|---|---|
| Locus | scaffold5137.1 : 11425 ... 44079 : - |
| To GenomeBrowser | scaffold5137.1:11425..44079 |
| Genes list of scaffold | scaffold5137.1 |
| Synonym | pfu_aug2.0_1313.1_11588 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5137.1_67174.t1 | 1 | 1 | Laminin_G_2 | 12 | 93 | 1.7e-08 | 34.5 | 1.5e-11 | 2.5e-08 | 34.0 |
| pfu_aug1.0_5137.1_67174.t1 | 1 | 1 | Laminin_G_3 | 12 | 92 | 1.2e-07 | 32.0 | 1.4e-10 | 2.3e-07 | 31.1 |
| pfu_aug1.0_5137.1_67174.t1 | 1 | 1 | VWC | 111 | 171 | 6.9e-12 | 45.2 | 4.2e-15 | 6.9e-12 | 45.2 |
| pfu_aug1.0_5137.1_67174.t1 | 2 | 1 | EGF_CA | 177 | 211 | 4.1e-11 | 42.6 | 2.3e-06 | 0.0037 | 17.2 |
| pfu_aug1.0_5137.1_67174.t1 | 2 | 1 | EGF | 177 | 208 | 5.2e-07 | 29.5 | 8.3e-08 | 0.00014 | 21.7 |
| pfu_aug1.0_5137.1_67174.t1 | 2 | 1 | EGF_3 | 181 | 211 | 5.3e-09 | 35.8 | 2.6e-10 | 4.2e-07 | 29.7 |
| pfu_aug1.0_5137.1_67174.t1 | 2 | 2 | EGF_CA | 213 | 252 | 4.1e-11 | 42.6 | 4.0e-13 | 6.6e-10 | 38.8 |
| pfu_aug1.0_5137.1_67174.t1 | 2 | 2 | EGF_3 | 226 | 250 | 5.3e-09 | 35.8 | 4.6e-07 | 0.00077 | 19.3 |
| pfu_aug1.0_5137.1_67174.t1 | 2 | 2 | EGF | 228 | 252 | 5.2e-07 | 29.5 | 1.4e-07 | 0.00023 | 21.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5137.1_67174.t1 | gi|241174173|ref|XP_002410973.1| | protein kinase C-binding protein NELL1, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5137.1_67174.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5137.1_67174.t1 gtttctagaactggagagtagcggtagaagagacgaggttcgtttccattatactcatgaccaacagatccacactataa cattcccatatagacttgcggacaaccagtggcacaaggtggccctgtctctgtccggaactcatttgactttatttgtg aactgtagtaaaatctatgagcgggtgatacaaactgtagatcgtgatcctatctcgggcagcagtgtaaaactttatat aggacaacgtaatgctcaacatgccaaatttaggcttcagcaagcagagaacaggatatcagctctagagcagtgtgaat gtcggaagagctgttatcagaacggtacctcctacaaggagggagaggtgtggcacaaggaccaatgtacagtctgcgga tgtagggatggtagaatggaatgtaaaagactcgatccagaggaaaattgcccgaacttaaattgtccagaagaaaaacg tctacatatccagggtgaatgctgtccggtctgtgaaggaacagacttttgcggtcaaggccatgattgtcatgacaatg ccacgtgtttgaatcttgccactcgttatatgtgccaatgtgacattggattcagaggagacgggataaactgtgaagac attgacgagtgtcttacaaagggaggtaaattcggtcatcactgcaatggtaacacccgctgtgtgaacaccgtaggctc atacatgtgtaaatgtgccagtggctacacccctgacaacccgtactcctgcacggaagaagttatcgtcatctttgttt ctcatcatgccacaaaacgttgtgattatcgtaccaattattccaatgacgaaacagattttgaaaacaaatga |
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Protein
| Protein ID | pfu_aug1.0_5137.1_67174.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5137.1_67174.t1 FLELESSGRRDEVRFHYTHDQQIHTITFPYRLADNQWHKVALSLSGTHLTLFVNCSKIYERVIQTVDRDPISGSSVKLYI GQRNAQHAKFRLQQAENRISALEQCECRKSCYQNGTSYKEGEVWHKDQCTVCGCRDGRMECKRLDPEENCPNLNCPEEKR LHIQGECCPVCEGTDFCGQGHDCHDNATCLNLATRYMCQCDIGFRGDGINCEDIDECLTKGGKFGHHCNGNTRCVNTVGS YMCKCASGYTPDNPYSCTEEVIVIFVSHHATKRCDYRTNYSNDETDFENK |
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