Gene
| Gene Model ID | pfu_aug1.0_514.1_43713 |
|---|---|
| Locus | scaffold514.1 : 24017 ... 42605 : - |
| To GenomeBrowser | scaffold514.1:24017..42605 |
| Genes list of scaffold | scaffold514.1 |
| Synonym | pfu_aug2.0_422.1_07492 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_514.1_43713.t1 | 2 | 1 | LIM | 20 | 76 | 4.7e-31 | 106.6 | 4.2e-19 | 1.3e-15 | 57.2 |
| pfu_aug1.0_514.1_43713.t1 | 2 | 2 | LIM | 82 | 136 | 4.7e-31 | 106.6 | 2.1e-18 | 6.4e-15 | 54.9 |
| pfu_aug1.0_514.1_43713.t1 | 1 | 1 | Homeobox | 215 | 270 | 4.3e-15 | 55.0 | 2.6e-18 | 7.8e-15 | 54.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_514.1_43713.t1 | gi|143347423|gb|ABO93221.1| | Islet [Platynereis dumerilii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 2 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_514.1_43713.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_514.1_43713.t1 atgactgcagacactcagcctcctccgcagccaaaaagaaagcggcgcgtgtctgtttgtgtgggatgtgggtcccagat ccaggatcagttcatcttgagggtggccccggacttggagtggcacgcctcatgtctcaagtgtgcggactgtaaccaac accttgatgaaagttgtacctgcttcgtgaaggacggaaagacgtactgtaggagggactatactagaatatttggagct aaatgtgggaagtgcaatcaatcttttggtaaaagtgactttgtaatgagggcaaggaataaagtatatcatatagactg tttccggtgtgtggcatgcagcagacaactcatacccggggatgaattcgctatcagagacgatgaactattttgtaaag cggatcacgacgtcgtggaaaggtcctgtagtaaggaaaacggaaacggaagtagtgaagaagacagtccaaaaagttca aagatcaggaaaataaacaatgacgataacaacaacaataataattctaatgaaatttccaaaaatggattgcatctagc tggtagagcagagcaagtatcgagtggaaaaggaggcggtttacgtagtcatagtattcacaaaaatgaacaaaagccaa ctcgtgtacgaactgttcttaacgagaaacaattacatactcttagaacatgttataatgcaaacccaagaccagacgcc ttaatgaaagaacagttagtagaaatgacaggtctaagcccgagggtaatccgagtgtggttccagaacaagcgctgcaa agacaaaaagagaagcatcatgatgaaacagattcaacagcaacagcaggaaaagaatggaggtcggcttcatggtcctc tacaaggcgttccaatggtagcgtccagtcctgtacgtcatgagagtcccatgcaggcgaatgctgtagaagttcagagt taccaacctccatggaaggcccttagtgacttcgccatgcaaagtgaattagaacacccgcctttccagcaattgatgaa ttcatttgataccatggattcagatgacacatctccatatccaaatgaaatttacagcgacggatacggaagtgcgtgga taagtggagaaatgcatgatgggaatatatcagactctgaatgtggggaatccccgtccgaaatgtccagtcctttaagt caatga |
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Protein
| Protein ID | pfu_aug1.0_514.1_43713.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_514.1_43713.t1 MTADTQPPPQPKRKRRVSVCVGCGSQIQDQFILRVAPDLEWHASCLKCADCNQHLDESCTCFVKDGKTYCRRDYTRIFGA KCGKCNQSFGKSDFVMRARNKVYHIDCFRCVACSRQLIPGDEFAIRDDELFCKADHDVVERSCSKENGNGSSEEDSPKSS KIRKINNDDNNNNNNSNEISKNGLHLAGRAEQVSSGKGGGLRSHSIHKNEQKPTRVRTVLNEKQLHTLRTCYNANPRPDA LMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQIQQQQQEKNGGRLHGPLQGVPMVASSPVRHESPMQANAVEVQS YQPPWKALSDFAMQSELEHPPFQQLMNSFDTMDSDDTSPYPNEIYSDGYGSAWISGEMHDGNISDSECGESPSEMSSPLS Q |
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