Gene
| Gene Model ID | pfu_aug1.0_5146.1_52461 |
|---|---|
| Locus | scaffold5146.1 : 162 ... 8316 : + |
| To GenomeBrowser | scaffold5146.1:162..8316 |
| Genes list of scaffold | scaffold5146.1 |
| Synonym | pfu_aug2.0_635.1_17666 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5146.1_52461.t1 | 2 | 1 | Xan_ur_permease | 2 | 55 | 6.2e-12 | 44.7 | 4.2e-16 | 6.2e-12 | 44.7 |
| pfu_aug1.0_5146.1_52461.t1 | 2 | 2 | Xan_ur_permease | 75 | 94 | 6.2e-12 | 44.7 | 0.18 | 2700.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5146.1_52461.t1 | gi|291228136|ref|XP_002734021.1| | 7.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5146.1_52461.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5146.1_52461.t1 atgacactgataccagatccggtggtaggtggcgtgctcactgttggcctcggtatggtaaccatcatgggtttttcaac tttgacatatatagacatgacatcaactaggaacataaccatcctggcaatgtccatttacctcggtctcatggtacctc aatgggttcaacaacatccttcggccataaatacaggctcacaagtattggatcagatgctgaatgttttactagggact gcgatgtttgttggtggagtgttgggatttatccttgataacattgtgcctgggactgtgatgtttgttgccgaagcatt gggattcattattgataatattgttcctggtaagtattatcagcaaattgttggcattcccatgggtaccaattgcgccc cactgcttgcggacttgtttttatattcatacgaagctgacttcatccagatcttgctctcgactggacgaaagcacatc gcatctcagttcaattttaccttcagatacatagatgaggtgttgtccaacaataacccgaactttaaggataatctaca tgaactctatcctcatgagctagagatcaaggaaacaactgagagcgccgacatatccgcttcgtacttggatatacttc tatctttcgacgcaaacggtcatttgaacacctcactgtatgacaagcgtgatgatttcagctttcacataactaacttc ccttttatgagtagcaacattccttccttccctgcttatggcgtttttgtttcccagctcatatggttcgcaatcgttcc tatggaaattctgagcaagtttgactcgcaaggttataacagattacaaatgcatagaaggaacgacgagactcaccgca aaactctatcaaaattaaaaaaagcagcggtctttaacaaccaccctgttctctccttgggcatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_5146.1_52461.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5146.1_52461.t1 MTLIPDPVVGGVLTVGLGMVTIMGFSTLTYIDMTSTRNITILAMSIYLGLMVPQWVQQHPSAINTGSQVLDQMLNVLLGT AMFVGGVLGFILDNIVPGTVMFVAEALGFIIDNIVPGKYYQQIVGIPMGTNCAPLLADLFLYSYEADFIQILLSTGRKHI ASQFNFTFRYIDEVLSNNNPNFKDNLHELYPHELEIKETTESADISASYLDILLSFDANGHLNTSLYDKRDDFSFHITNF PFMSSNIPSFPAYGVFVSQLIWFAIVPMEILSKFDSQGYNRLQMHRRNDETHRKTLSKLKKAAVFNNHPVLSLGM |
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