Gene
| Gene Model ID | pfu_aug1.0_5161.1_59725 |
|---|---|
| Locus | scaffold5161.1 : 29191 ... 34555 : - |
| To GenomeBrowser | scaffold5161.1:29191..34555 |
| Genes list of scaffold | scaffold5161.1 |
| Synonym | pfu_aug2.0_740.1_01088 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to FR715646 (MgC1q67). 117 bits, 1e-24 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5161.1_59725.t1 | 1 | 1 | C1q | 94 | 221 | 2.6e-22 | 79.1 | 4.7e-26 | 3.5e-22 | 78.7 |
Transcript
| Transcript ID | pfu_aug1.0_5161.1_59725.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5161.1_59725.t1 atgaccacgtctaccaaaatctgtcaaggtccacaacgatttaccgagatcgccggaagaaggagtgtacaagagtacgc gagggatgctataatccaggagctgatggaacgagtggggagtttggaagagaaagttaaggaaatacctaaactgaaac aaagaatacaacaatgcgagatgggattaaagaatatatccacaagcaacaaaagtgattacaaaagagttttactagaa ggtttgccagatacaaactcagagtcgactcgtgtatcattctacgcccatctatccaagaatttagccggtataggagt gcaccacccaatcgtattcgataccgtgcgttacaatgatgggaatgcttataacaaggtcgacggagaattcacggcta acgttccgggaacttacttctttatctggacaatatctgcacgtgatcgcacgtacatggaaacagagcttgtcgtaaat ggcgttgtattcggacatgttattggagatgcggctgaccacgatgactggggtgtagcaacaggttttgtcattgttcg actcaatcttaatgacacagtgtggattcgttctggacctgtgaacaatggtcagttgacgggtaccggttatggtacaa catcatttggtggttaccttctctatcagtaa |
|
Protein
| Protein ID | pfu_aug1.0_5161.1_59725.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5161.1_59725.t1 MTTSTKICQGPQRFTEIAGRRSVQEYARDAIIQELMERVGSLEEKVKEIPKLKQRIQQCEMGLKNISTSNKSDYKRVLLE GLPDTNSESTRVSFYAHLSKNLAGIGVHHPIVFDTVRYNDGNAYNKVDGEFTANVPGTYFFIWTISARDRTYMETELVVN GVVFGHVIGDAADHDDWGVATGFVIVRLNLNDTVWIRSGPVNNGQLTGTGYGTTSFGGYLLYQ |
|