Gene
Gene Model ID | pfu_aug1.0_5161.1_59725 |
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Locus | scaffold5161.1 : 29191 ... 34555 : - |
To GenomeBrowser | scaffold5161.1:29191..34555 |
Genes list of scaffold | scaffold5161.1 |
Synonym | pfu_aug2.0_740.1_01088 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715646 (MgC1q67). 117 bits, 1e-24 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5161.1_59725.t1 | 1 | 1 | C1q | 94 | 221 | 2.6e-22 | 79.1 | 4.7e-26 | 3.5e-22 | 78.7 |
Transcript
Transcript ID | pfu_aug1.0_5161.1_59725.t1 |
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Definition | - |
>pfu_aug1.0_5161.1_59725.t1 atgaccacgtctaccaaaatctgtcaaggtccacaacgatttaccgagatcgccggaagaaggagtgtacaagagtacgc gagggatgctataatccaggagctgatggaacgagtggggagtttggaagagaaagttaaggaaatacctaaactgaaac aaagaatacaacaatgcgagatgggattaaagaatatatccacaagcaacaaaagtgattacaaaagagttttactagaa ggtttgccagatacaaactcagagtcgactcgtgtatcattctacgcccatctatccaagaatttagccggtataggagt gcaccacccaatcgtattcgataccgtgcgttacaatgatgggaatgcttataacaaggtcgacggagaattcacggcta acgttccgggaacttacttctttatctggacaatatctgcacgtgatcgcacgtacatggaaacagagcttgtcgtaaat ggcgttgtattcggacatgttattggagatgcggctgaccacgatgactggggtgtagcaacaggttttgtcattgttcg actcaatcttaatgacacagtgtggattcgttctggacctgtgaacaatggtcagttgacgggtaccggttatggtacaa catcatttggtggttaccttctctatcagtaa |
Protein
Protein ID | pfu_aug1.0_5161.1_59725.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5161.1_59725.t1 MTTSTKICQGPQRFTEIAGRRSVQEYARDAIIQELMERVGSLEEKVKEIPKLKQRIQQCEMGLKNISTSNKSDYKRVLLE GLPDTNSESTRVSFYAHLSKNLAGIGVHHPIVFDTVRYNDGNAYNKVDGEFTANVPGTYFFIWTISARDRTYMETELVVN GVVFGHVIGDAADHDDWGVATGFVIVRLNLNDTVWIRSGPVNNGQLTGTGYGTTSFGGYLLYQ |