Gene
| Gene Model ID | pfu_aug1.0_5161.1_59727 |
|---|---|
| Locus | scaffold5161.1 : 46274 ... 61938 : - |
| To GenomeBrowser | scaffold5161.1:46274..61938 |
| Genes list of scaffold | scaffold5161.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5161.1_59727.t1 | 2 | 1 | AAA_11 | 4 | 98 | 2.1e-16 | 60.2 | 5.2e-18 | 4.5e-15 | 55.8 |
| pfu_aug1.0_5161.1_59727.t1 | 1 | 1 | AAA_19 | 8 | 53 | 2.4e-08 | 33.6 | 1.1e-10 | 9.5e-08 | 31.6 |
| pfu_aug1.0_5161.1_59727.t1 | 2 | 1 | Viral_helicase1 | 9 | 33 | 7.9e-06 | 25.5 | 0.00032 | 0.27 | 10.6 |
| pfu_aug1.0_5161.1_59727.t1 | 1 | 1 | AAA_12 | 112 | 247 | 3.3e-38 | 131.0 | 8.60005e-41 | 7.5e-38 | 129.9 |
| pfu_aug1.0_5161.1_59727.t1 | 2 | 2 | Viral_helicase1 | 156 | 244 | 7.9e-06 | 25.5 | 4.2e-05 | 0.036 | 13.5 |
| pfu_aug1.0_5161.1_59727.t1 | 2 | 2 | AAA_11 | 233 | 249 | 2.1e-16 | 60.2 | 0.091 | 79.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5161.1_59727.t1 | gi|301613021|ref|XP_002936016.1| | 2.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_5161.1_59727.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5161.1_59727.t1 gtgttaatggccaaagattacgtattaatcaaaggttaccctggtacaggtaaaacttccactattgtgtcgttggttcg agtcttggtaactctggaaaagtctgtactgttgaccagctatacacattctgctgtggataacatcttattaaaactta aaaaggttggagtgaattttcttcggctagggaaagtgagtaaggttcatgctgatatacagccatatactgcagagaga caggctcagggattaacatccgtgggagaacttagggaattctacaattctcaggtattggatgaagaaccttggttagc accagtattaggaatggagccctataaagctgctgttttcataaacacggaacatattcaagctcatgaggaacgtgatc gcgctgggctgataaaaaatgttacagagagtcgtctggtatgctccatcacacaatcgtgtgtcaagtgtggtatagag cagagtgatataggagttatagccccttaccgtcaccaggtggcgctgataaagaatgaccttcggaatttcccagatgt agaagttaatacagtagatcagtatcagggtcgggacaaagatgtcattattatttccttcaccagaagtttttccaact caaacgaggcagagagcaagtctggacagctcctgaaagacatcagaagattgaatgtggctatcactcgtgctaagaag aagctgatcatgattggtgatatacgtacacttaaacggtacagtcctcttaaacagatcatagatatgatggaacacat gcaggcagtatccttttttaaagctatggtctttgaatga |
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Protein
| Protein ID | pfu_aug1.0_5161.1_59727.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5161.1_59727.t1 VLMAKDYVLIKGYPGTGKTSTIVSLVRVLVTLEKSVLLTSYTHSAVDNILLKLKKVGVNFLRLGKVSKVHADIQPYTAER QAQGLTSVGELREFYNSQVLDEEPWLAPVLGMEPYKAAVFINTEHIQAHEERDRAGLIKNVTESRLVCSITQSCVKCGIE QSDIGVIAPYRHQVALIKNDLRNFPDVEVNTVDQYQGRDKDVIIISFTRSFSNSNEAESKSGQLLKDIRRLNVAITRAKK KLIMIGDIRTLKRYSPLKQIIDMMEHMQAVSFFKAMVFE |
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