Gene
| Gene Model ID | pfu_aug1.0_5165.1_45126 |
|---|---|
| Locus | scaffold5165.1 : 19826 ... 34008 : + |
| To GenomeBrowser | scaffold5165.1:19826..34008 |
| Genes list of scaffold | scaffold5165.1 |
| Synonym | pfu_aug2.0_510.1_00827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5165.1_45126.t1 | 2 | 1 | C1q | 16 | 49 | 5.4e-26 | 91.0 | 0.044 | 330.0 | 1.2 |
| pfu_aug1.0_5165.1_45126.t1 | 2 | 2 | C1q | 73 | 195 | 5.4e-26 | 91.0 | 5.6e-29 | 4.1e-25 | 88.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5165.1_45126.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5165.1_45126.t1 atggagacgattcatgtattgatgtgcgcatttctgatctttgtcaatgtgaccattgccaaggctacccaaaaggacct gagcctaatgttggtacagacactacagaatcaactacagacatgtatggaccagaatgcaatgcttgtccaacgtaact gtaatgctggaagaaacaaaactcacgtcattgagccaccgagaaggcattacatagcttttcatgcgggattaagtaac catgtaaaggaccttccacataactacaaacttgtgttcgacaagatctatctaaaccagggcaaggcctatgatccaca cactggtgtatttacttgcccaaatgacgggatctatgttttccactggactatccttacacaagcaggtaaacatttct atgccgaatatatgttgaatggaaacgttgttggacgatcacatcctaatgccgccactaccaaccgcgccgccagtagt tcagttgtgctgcagttgaagaaaggtgacaagacttggatagagccttcaggtggacacactggtcaatacgcgattgc aggatggtctttctactcaggatatagactttaa |
|
Protein
| Protein ID | pfu_aug1.0_5165.1_45126.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5165.1_45126.t1 METIHVLMCAFLIFVNVTIAKATQKDLSLMLVQTLQNQLQTCMDQNAMLVQRNCNAGRNKTHVIEPPRRHYIAFHAGLSN HVKDLPHNYKLVFDKIYLNQGKAYDPHTGVFTCPNDGIYVFHWTILTQAGKHFYAEYMLNGNVVGRSHPNAATTNRAASS SVVLQLKKGDKTWIEPSGGHTGQYAIAGWSFYSGYRL |
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