Gene
| Gene Model ID | pfu_aug1.0_5170.1_67184 |
|---|---|
| Locus | scaffold5170.1 : 9836 ... 16154 : + |
| To GenomeBrowser | scaffold5170.1:9836..16154 |
| Genes list of scaffold | scaffold5170.1 |
| Synonym | pfu_aug2.0_74.1_13547 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5170.1_67184.t1 | 1 | 1 | Exo_endo_phos | 43 | 248 | 6.2e-06 | 26.3 | 3.2e-09 | 9.4e-06 | 25.7 |
| pfu_aug1.0_5170.1_67184.t1 | 1 | 1 | Exo_endo_phos_2 | 133 | 252 | 1.9e-19 | 69.4 | 1.3e-22 | 3.9e-19 | 68.4 |
| pfu_aug1.0_5170.1_67184.t1 | 1 | 1 | RVT_1 | 534 | 631 | 4.7e-11 | 42.4 | 4.1e-14 | 1.2e-10 | 41.0 |
Transcript
| Transcript ID | pfu_aug1.0_5170.1_67184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5170.1_67184.t1 atgggtctcaattctaggtcgtcccacagaaatctggtgcctgtgaaacgtccctgtgccagagtcacaaaagagaatag taccctcggtcagagctataatcaactgaagaataaatttgacgagttccaactacgaattcgggacattaagccgctta ttataggaatcacagaggtaaaagcaaaaaatgcgacatatacgccaaatgctgcagaatattcaatagaatggacgaag gaatatagaatgtttcatacaaatgttgacaatacaactgggagagggatattactatacattcatgagtcactatatgt agaggaggttaagatgcaggtacagtttgaggaaaatgtgtttgttaaaataaaagtcagtaatgcagacaacatgcttg tgggagtaatatatcgatctccgtcagacaactcggagaggaaaaatgaaaatttaagagaacttcttatggaagcagca aatgacagatattcacattgcattattatgggagattttaattacccgaatatcaactgggatttgacctcaacaaaaaa cgaaaattcagaggaacagaaattcttggattgcatacaggataattatttattccaagtgatcaataaaccaacacgat ggagaggatcaaacatcccaagtatacttgacttggttataacacgggacgaaaatgccatcgatgacattgaatatcaa agtccattggggaaaagtgatcactgtatgatatactttaactatgtatgcagcacattgatgagaagtattgtaaaaag gagacgaagctatgctaaagcaaacttcacaagcatgaaaagagaattcagcaatatggactgggaaaatatcttttcag ctagtgattcggtggaagaaatgtggaaaaagttcagaaagaaactgcttgaaactgaaaatatgtttgttccactagta acagcaaaaaataatcagaaatcacaaacaccgctggataaggaaactctcaacttaatcaaagagaaaacaaaactatc tcggaaatctgttgcgactagagactcacaaatacggcagaaatacaataggacaagaaaccaagtagtaaaacgtgtga ggaaagcaaggaaacagtatgaaaaaggactggcagaagacgctaagaaaaatccaaaaagaatatggcaatacataaac tctaaaagtaagacaagacaggggataggagatctgtgtatcgatcctaagaatccaaaatctgaaaagacagaagatga agaggaaaaagccaatatccttgcagaatttttcagtagtgtctttacagtagagccagaaggtgaaataccgaaactta aagaaagacaaataattgtgggatgggaaaatgtgcacataaaggaggaagacatcacaaaatatctaggtcaactaaga atagacaaatctccaggaatggatggaatacatcccaaaatactgaaagagctaaaagaagaattagcaaagccacttgc gatgatattcagaaaatcacttgaagataaagatataccggaagaatggaaaactgctcgcattagtgcaatattcaaaa agggaagcaaatccattgcagggaactatcgaccagtaagtctcacctcgatagtagggaaagttatggagaaacttgtc agaaatcatctactagaacacttcattacaaacagcctttttaccaacaaacaatacggatttatcggaggaagatcaac ttcattgcaattactcagagtattagatgaatggactgaagctatagatgctgggaaagatgtagattgtgtatacatgg actatcagaaagctttcgacactgtaccacataaacgattagtaacaagactatacctgggaacgaactcgcaaccttct gatgtcaagaccgatgctctaccgagtgagccaaagagacgtcgtactggaccagtctag |
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Protein
| Protein ID | pfu_aug1.0_5170.1_67184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5170.1_67184.t1 MGLNSRSSHRNLVPVKRPCARVTKENSTLGQSYNQLKNKFDEFQLRIRDIKPLIIGITEVKAKNATYTPNAAEYSIEWTK EYRMFHTNVDNTTGRGILLYIHESLYVEEVKMQVQFEENVFVKIKVSNADNMLVGVIYRSPSDNSERKNENLRELLMEAA NDRYSHCIIMGDFNYPNINWDLTSTKNENSEEQKFLDCIQDNYLFQVINKPTRWRGSNIPSILDLVITRDENAIDDIEYQ SPLGKSDHCMIYFNYVCSTLMRSIVKRRRSYAKANFTSMKREFSNMDWENIFSASDSVEEMWKKFRKKLLETENMFVPLV TAKNNQKSQTPLDKETLNLIKEKTKLSRKSVATRDSQIRQKYNRTRNQVVKRVRKARKQYEKGLAEDAKKNPKRIWQYIN SKSKTRQGIGDLCIDPKNPKSEKTEDEEEKANILAEFFSSVFTVEPEGEIPKLKERQIIVGWENVHIKEEDITKYLGQLR IDKSPGMDGIHPKILKELKEELAKPLAMIFRKSLEDKDIPEEWKTARISAIFKKGSKSIAGNYRPVSLTSIVGKVMEKLV RNHLLEHFITNSLFTNKQYGFIGGRSTSLQLLRVLDEWTEAIDAGKDVDCVYMDYQKAFDTVPHKRLVTRLYLGTNSQPS DVKTDALPSEPKRRRTGPV |
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