Gene
| Gene Model ID | pfu_aug1.0_5177.1_45131 |
|---|---|
| Locus | scaffold5177.1 : 51986 ... 70931 : + |
| To GenomeBrowser | scaffold5177.1:51986..70931 |
| Genes list of scaffold | scaffold5177.1 |
| Synonym | pfu_aug2.0_213.1_10446 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5177.1_45131.t1 | 3 | 1 | MBT | 687 | 742 | 0.0 | 253.4 | 2.6e-25 | 9.7e-22 | 76.6 |
| pfu_aug1.0_5177.1_45131.t1 | 3 | 2 | MBT | 782 | 846 | 0.0 | 253.4 | 3.3e-29 | 1.2e-25 | 89.1 |
| pfu_aug1.0_5177.1_45131.t1 | 3 | 3 | MBT | 885 | 951 | 0.0 | 253.4 | 1.0e-28 | 3.7e-25 | 87.6 |
| pfu_aug1.0_5177.1_45131.t1 | 1 | 1 | SAM_1 | 1007 | 1071 | 1.4e-13 | 50.7 | 6.5e-17 | 2.4e-13 | 50.0 |
| pfu_aug1.0_5177.1_45131.t1 | 1 | 1 | SAM_2 | 1007 | 1070 | 5.4e-07 | 29.3 | 2.7e-10 | 1.0e-06 | 28.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5177.1_45131.t1 | gi|297259796|ref|XP_001084338.2| | PREDICTED: lethal(3)malignant brain tumor-like protein-like [Macaca mulatta] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5177.1_45131.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5177.1_45131.t1 atgcagaaaaaggtccacaaagcttcatctctggtcaatctacagaacaagggtagccagcagtttgtggtgtcccagtt accgaccctggctcaattgaacaccaagacgacgatgggaatcacacagcctacaacaggaggaatatcacagcagacat ttacactccgacctgtcaaacgtatgccagttccaatcagtatgcctggaggacagcaaatgtaccaagcacagatccgt atccaaggaaatgtagcgacagaaatcaaacctcctggacagaacgatggttctaagtcacctggcagtgctggaaatca gtacttcactgtcctacagaaacctaacacctcacagcctgtcaatcctgtcaatcactccaacataactataatacaga atcctacagtatcatcacccatcacacccaaagctttaacacagcagcctgccactttctccctcatccagaagccggtc tcacaatccagtaagcctgggcaacaggttccttactcaccaagcctacagaaatccccacatcccatgatgaatcaaac tcttcctaacttctcaatcatacagaagccgaattccactcaggctcagatggtagtatcacctcagattttacagtcta cgtcaaatccgctaacaaaaggttgtgttgtggtgcaacaggcatcatcaacacagccatcagcatataagcaggacatt aattcacgaaagacaccacctgtaagtgttcaaacttatgagacttctcctcagcaggctgttactgaaatcaaatttca gattccgcctcagctacagaaaccagaatttgtcagtatgaaacccagtactgtaaatggtacagataaagaatctggaa atataccggccacagtgttaacatcaggaatgtcagaaaatgccaaaagtgttcgagaaatagttgcaactggtgaaaat ttacttgaggacttggaaaaatttacaaaggaaacttcgagtcaatcagctgacaatgtacagagaagtggtgctaagga ggaatctgttgaaaatgttcaaaactcagaaaaaagcagcaaaaatgatgggaaatcaaaagtaaactcatcagataaat ctaactcaaatactactcaagaaaatacgtcaaattctgtagagaaaatggatgttgattcaaaattagaacctaaaata gagagtgacaaacaacatgacaagaacgatagtgtcaaagttgacaaagcagaatcagatgataaaacaggagtgaaaga taaagtggaaaagacagaggaaaaaagtgaaaaatgtgactctacctcagccaaatcctctgaagatggagagtccgtga agagtgaaacgttatctaaacagggagagaataagaacagtggtcagtcaggtatagacgatcctgccataacgtctacc accacatacgactatgatggaatggagtggaaggacggagtaggcacgctggaaggcagtgatctgaagttcagactgaa tgagtttggaggaattgaggtgatctcggaggaccttacatgtaacgagactttagactcgagttcagagttggatgctc caaatccaataaagtcggaatctgaagagaaacctgatgcaagtggtgataacactaaagctgatacaggttcctctgaa attaaagaagaggcaatggaggaagacatagatgaaaataagaaagatgaagtatgtcagtgtgaaaactgtggagagta tggcttctatagtgaatttattaaatcaggtcgtttctgcggacatcactgctctacgctgtacgctgccaagaaagcaa agggagagaaatccgcatattcggcaaaaatgtggaagaagaaaaagcagatgttaggaaaaggtctagattcaagtgaa ctccttaaaccaggacctggacgtaaaccgaagaatatgaactggtcgacttacctggagagaactaactctgtaggagc acctcatagactgtttaaagagcctttccctgctaccaagaatggatttaaggttggtatgaagcttgagggggtggatc ccaaacaccagtccctgttctgtgtgatgacggtggtggagatctgtggatacaggatacggttacactttgacggatac tccgagtgttatgacttctggaccaatgccgactcggcttacatcttccctgttggatttaccacagatggttttaactg gacaaattacctgaagttagccaaggctacacctgcccctaaacagctcttcaacaatctgccgataccacctgtgacac ctcatggtttccgtattggacataaactggaggcagtagataagaagaacagtaccctgacgtgcgctacgacaatagtg gatacgatgggagataagatcctgattcgttttgacggttgggaggatacgtacgattattggtgtgatgtatcatcacc taacatacatcctgtcggctggtgtgaagagaacgacaaacctctctctcctcctggagaggagtatgagaagacaccat ttcattggaaggattacttggcaaaaacaaacacacaagctgttccaagcaggttcttcaagcctagagaacctcttgga tttgaaaaaggaatgaaactggaatgtacagacaagagaaatccaattctgatacgtgttgccacggtagcagatattga ttgtcacatgatacgtattcactttgacggctgggacgattgttacgattattgggtcgaggatgattcctctgagatac acccacctggatggtgtcacaaaactggtcaccccctgtctccacctccagctcaccacactgacaatgttcaaccccat gatacgttacaaaacggtgtccatgaatcagtatttgcctcagcaatgcagacaaaacctgtcaaagattttcctctttg ttgggagcaacattctaaactcttaccgggcgttgacaaagtcaaaggctcggaagtatccaagtggagcattgatcaag tcgctcagttcgttaaaaacttgccaggatgtgaagattactcaaaaacattcaaagaacagcaaatagacggtgaagca ttcatgcttataacacagactgacctagtgaaaattctggaaatcaagcttggtcctgcgctcaaaatctacaacagtct tcttgtactcaaaaattcacaagatgtgtaa |
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Protein
| Protein ID | pfu_aug1.0_5177.1_45131.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5177.1_45131.t1 MQKKVHKASSLVNLQNKGSQQFVVSQLPTLAQLNTKTTMGITQPTTGGISQQTFTLRPVKRMPVPISMPGGQQMYQAQIR IQGNVATEIKPPGQNDGSKSPGSAGNQYFTVLQKPNTSQPVNPVNHSNITIIQNPTVSSPITPKALTQQPATFSLIQKPV SQSSKPGQQVPYSPSLQKSPHPMMNQTLPNFSIIQKPNSTQAQMVVSPQILQSTSNPLTKGCVVVQQASSTQPSAYKQDI NSRKTPPVSVQTYETSPQQAVTEIKFQIPPQLQKPEFVSMKPSTVNGTDKESGNIPATVLTSGMSENAKSVREIVATGEN LLEDLEKFTKETSSQSADNVQRSGAKEESVENVQNSEKSSKNDGKSKVNSSDKSNSNTTQENTSNSVEKMDVDSKLEPKI ESDKQHDKNDSVKVDKAESDDKTGVKDKVEKTEEKSEKCDSTSAKSSEDGESVKSETLSKQGENKNSGQSGIDDPAITST TTYDYDGMEWKDGVGTLEGSDLKFRLNEFGGIEVISEDLTCNETLDSSSELDAPNPIKSESEEKPDASGDNTKADTGSSE IKEEAMEEDIDENKKDEVCQCENCGEYGFYSEFIKSGRFCGHHCSTLYAAKKAKGEKSAYSAKMWKKKKQMLGKGLDSSE LLKPGPGRKPKNMNWSTYLERTNSVGAPHRLFKEPFPATKNGFKVGMKLEGVDPKHQSLFCVMTVVEICGYRIRLHFDGY SECYDFWTNADSAYIFPVGFTTDGFNWTNYLKLAKATPAPKQLFNNLPIPPVTPHGFRIGHKLEAVDKKNSTLTCATTIV DTMGDKILIRFDGWEDTYDYWCDVSSPNIHPVGWCEENDKPLSPPGEEYEKTPFHWKDYLAKTNTQAVPSRFFKPREPLG FEKGMKLECTDKRNPILIRVATVADIDCHMIRIHFDGWDDCYDYWVEDDSSEIHPPGWCHKTGHPLSPPPAHHTDNVQPH DTLQNGVHESVFASAMQTKPVKDFPLCWEQHSKLLPGVDKVKGSEVSKWSIDQVAQFVKNLPGCEDYSKTFKEQQIDGEA FMLITQTDLVKILEIKLGPALKIYNSLLVLKNSQDV |
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