Gene
| Gene Model ID | pfu_aug1.0_5215.1_45141 |
|---|---|
| Locus | scaffold5215.1 : 57278 ... 59965 : - |
| To GenomeBrowser | scaffold5215.1:57278..59965 |
| Genes list of scaffold | scaffold5215.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5215.1_45141.t1 | 1 | 1 | RVT_1 | 6 | 92 | 2.1e-14 | 53.4 | 5.3e-18 | 3.9e-14 | 52.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5215.1_45141.t1 | gi|115908699|ref|XP_780253.2| | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_5215.1_45141.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5215.1_45141.t1 atgggtaatacacattctcaactcaaagcaatttcatgtggcgtcccacagggatcggtactcggtccactcttgtttct tatttatattaatgacttgcccctccacgtcaaatcatccagtttgagtctgtttgctgatgatgcaactctacataagt cagcaccttctgtagacttcgtcaagttgccactttcctcggatgttgataatgtaaataaatggtgccgggaaaatggt atgatcgttaatgaaaacaaaagtaaatgtatggtgattgctacttctcaaaaactttcaaaactacaaccaaatgcatt agcgatttatgtcaatggaaacacactcgaacacattgactgtgagaagttactgggagttcatatagacccttccttac aattcaataaacatgttgaccatgtatgtcgatctattacaccaaaaattgcctcattaagaaaaataaagcgatacctt cctctttcgtacagaaaactttactataacgcgtatattctcccatgcatagagtctgcctattgtttaacaatgtgggg aaatgcatccaaaattcatatggaaagaatccacaaattgcaaaaatgcgtcgcacgtattattctggatgcgccacctg acgcgccatcgctaccactctttactgaattgggttggctgactgttttcgaaagggtcgagttcaataagggtattctt ctgtacaaagctatacataatatgtgcccagaatacataacagatatgtttaaatttcagtcgtcttcgtatggcttgcg gtcctcgtcaaatcagcaaatgtctattccgaaacacaataacgagcttttcaaaaaatcttttcagtattctggagcaa ttatatggaataatctccccttgaacattagactggcctctaccctcggaacattcaagcataaactacataagtatata gtttcaaagcgataa |
|
Protein
| Protein ID | pfu_aug1.0_5215.1_45141.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5215.1_45141.t1 MGNTHSQLKAISCGVPQGSVLGPLLFLIYINDLPLHVKSSSLSLFADDATLHKSAPSVDFVKLPLSSDVDNVNKWCRENG MIVNENKSKCMVIATSQKLSKLQPNALAIYVNGNTLEHIDCEKLLGVHIDPSLQFNKHVDHVCRSITPKIASLRKIKRYL PLSYRKLYYNAYILPCIESAYCLTMWGNASKIHMERIHKLQKCVARIILDAPPDAPSLPLFTELGWLTVFERVEFNKGIL LYKAIHNMCPEYITDMFKFQSSSYGLRSSSNQQMSIPKHNNELFKKSFQYSGAIIWNNLPLNIRLASTLGTFKHKLHKYI VSKR |
|