Gene
| Gene Model ID | pfu_aug1.0_5215.1_45144 |
|---|---|
| Locus | scaffold5215.1 : 94504 ... 100885 : - |
| To GenomeBrowser | scaffold5215.1:94504..100885 |
| Genes list of scaffold | scaffold5215.1 |
| Synonym | pfu_aug2.0_38.1_26718 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Pifuc-IR-like |
| Description | Reciprocal BLASTP best hit to NCBI Accession NP_001116701 (Danio rerio). L1 domain of the insulin/IGF receptor like protein. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5215.1_45144.t1 | 2 | 1 | Recep_L_domain | 17 | 33 | 5.7e-26 | 90.6 | 0.76 | 5600.0 | -2.7 |
| pfu_aug1.0_5215.1_45144.t1 | 2 | 2 | Recep_L_domain | 73 | 184 | 5.7e-26 | 90.6 | 1.9e-29 | 1.4e-25 | 89.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5215.1_45144.t1 | gi|291241296|ref|XP_002740550.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5215.1_45144.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5215.1_45144.t1 atgttaaagttatcaaaaattgaatttttatttctttataaagatctactcttgcttcatattattgcttcgcccgaatt gtcgagtatacgaagcgatgcaagggtcggaatattaagtcattcatgttttaagatctataaacatgttcttagatgac tgatatgtggagacatcgatataagaaatgatgtgaaatattttagtcagctagaaaactgcacggttatagaaggacac ctccagattctgttaatagagggcgccactcaggaacaatatcaacaattagagtttcctgatctagtagaaattaccga ttatttccttcttttccgggtttatggtcttaaaactctcagtcacattttccccaatttgtctgttatacgaggacaga gactgttcttcgactttgctctggtagcctacgagatgatggacttggaagagctaggtttatggggtctaacttctata gagagaggcgctgtccgattggaaaagaatcctttgctttgctacattgacaccgtggattggaccaaaatagcagtagg catcaaagaatcatctgatcatttctttaaagagaacaaagacgtacgggaatgtgtcaacatgtgtcctcgaaactgta cggaaacaactttggacaaccgtaaagcaaggagatgctggactctcaaacactgccaaaggatactaagtaagcactct tatacttcacaatataaacgcatgggcggatcaaaaagaaattaa |
|
Protein
| Protein ID | pfu_aug1.0_5215.1_45144.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5215.1_45144.t1 MLKLSKIEFLFLYKDLLLLHIIASPELSSIRSDARVGILSHSCFKIYKHVLRXLICGDIDIRNDVKYFSQLENCTVIEGH LQILLIEGATQEQYQQLEFPDLVEITDYFLLFRVYGLKTLSHIFPNLSVIRGQRLFFDFALVAYEMMDLEELGLWGLTSI ERGAVRLEKNPLLCYIDTVDWTKIAVGIKESSDHFFKENKDVRECVNMCPRNCTETTLDNRKARRCWTLKHCQRILSKHS YTSQYKRMGGSKRN |
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