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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5227.1_30911
Locus scaffold5227.1 : 42136 ... 53925 : +
To GenomeBrowser scaffold5227.1:42136..53925
Genes list of scaffold scaffold5227.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5227.1_30911.t1 1 1 p450 61 309 0.0 235.2 0.0 0.0 235.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5227.1_30911.t1 gi|133918263|emb|CAJ84704.1| cytochrome P450 1A1 [Homo sapiens] 0.0

Transcript
Transcript IDpfu_aug1.0_5227.1_30911.t1
Definition-
>pfu_aug1.0_5227.1_30911.t1
atggacagccctcgtaccgtaattccaatatcaatttttgttacgaaaataaaaagggtaaacaagtacaagaataataa
agaaaataattattcatcgagaaatgtacatgcatgccaagcatttgacccaaatgatgctgtatgtattgcgatgggaa
gcataatatttcaagtcgtgtacggacaagctgaagaacgtaaactccaaaacatcattagaacttatgacgagaaagac
atccgtcatgctacagatgctttaatagcagcaacaaagcaatacagtgaagaggaaaaggcaagagtgaacctaaccga
cgagcaaatcgttaagaccatcggcgacttcctaggggccggctttgacccaacggccacagctatgaaatgggtattat
tgttccttgctgataatccatatgtccaggagaaggtgcaaagggagattgatgatgttgtcggatgtaaccgtctacca
acgatacttgatcggtcaagactctcttatacagaggcaatgatattggagtctctaagaatgggatgtatcgctccctt
ggctctaccacatggtacttatgaagatactgagcttctgggatatgacattcctaaacacactgtagtattttttaatc
tttattcctcaaactatgacgaggaagtatggaaccatccgtatgaattccgaccagagagatttttgaacaaaaaaggc
atgattgataacagagcaaaggagaacgtcctcacattcggggtaggacggagaagatgtgttggagagcaattagcccg
gatggaactgttcttgtgtcttagtatcattttacagagatacgtcataaggaaaccgctaggggaaacgtacatcctca
aaggcgatttttctttgatatatgagccaaaaccatttcaagtacaagtttatgcacgtgattaa

Protein
Protein IDpfu_aug1.0_5227.1_30911.t1
Definition-
>pfu_aug1.0_5227.1_30911.t1
MDSPRTVIPISIFVTKIKRVNKYKNNKENNYSSRNVHACQAFDPNDAVCIAMGSIIFQVVYGQAEERKLQNIIRTYDEKD
IRHATDALIAATKQYSEEEKARVNLTDEQIVKTIGDFLGAGFDPTATAMKWVLLFLADNPYVQEKVQREIDDVVGCNRLP
TILDRSRLSYTEAMILESLRMGCIAPLALPHGTYEDTELLGYDIPKHTVVFFNLYSSNYDEEVWNHPYEFRPERFLNKKG
MIDNRAKENVLTFGVGRRRCVGEQLARMELFLCLSIILQRYVIRKPLGETYILKGDFSLIYEPKPFQVQVYARD

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