Gene
| Gene Model ID | pfu_aug1.0_5232.1_23740 |
|---|---|
| Locus | scaffold5232.1 : 1479 ... 25171 : + |
| To GenomeBrowser | scaffold5232.1:1479..25171 |
| Genes list of scaffold | scaffold5232.1 |
| Synonym | pfu_aug2.0_75.1_16854 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5232.1_23740.t1 | 1 | 1 | Fibrinogen_C | 201 | 337 | 2.0e-28 | 99.6 | 1.5e-31 | 3.2e-28 | 98.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5232.1_23740.t1 | gi|194018644|ref|NP_001123408.1| | angiopoietin-related protein 1 precursor [Xenopus (Silurana) tropicalis] | 6.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_5232.1_23740.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5232.1_23740.t1 atgaataaacgagagagctcattcctcaatgctgcaaagctacgaaccacactttacatcgaggaggttcttcaaaagat tgcggtcatgaattttttcagcatgtttattgtcatactagctttatcccttactagcgtagtttgtgatactggagctg aagcggatattttcgtaccgaacttaaatcttcagaaggaattgcaagatattcgaaatcaaatttatcatgaaagtacc atccgacttcaatttgataaggaattgtcgtccatggcacgaagatataggacgttgattgtcgatcaaacgaatgctaa gattgaaaataataaaacgaagacggctctattaaaacttgaacaatctgttcaaaatcttcaacagaataccacagaaa aactcaataagtttgagactgatgtgacaagttttgctctagtttttcagactaataagaaagcaatgaacgattcctcc aagaaagtcaacattttagaagctgcctttcacgaactacaaagaaatttcactgaatcgaaaattaaattggacacagt gtcacaaactctgcaggaggccataaacaccatgaatgaacagtttgcagaattgaattcttcgattgttcagatgcaat ctactacaaaagaacacagcgtaagagggaataagtacatacatcagctcactgatggtcgattatgcagtctccgaata gaaatgacggactggaaaaacaaaagtgcatatgctgagtacagcacgtttcgcctagataacgagacggatggattcaa acttcatgtaggaggatttacaggaaacagaggtaattacatggttcagcacaatggaatgaaatttacaacaaaagata gagatcaggatacgtattcatcaaaaaattgtgccgttttcagatctggtgcctggtggtattatagttgcgtagcgtca aatctgaacggtgattataatttacgagaagcagcccgtggcgtgtattggggaggatcatacatgaagaagacggaaat gatgctgaaatgtagctga |
|
Protein
| Protein ID | pfu_aug1.0_5232.1_23740.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5232.1_23740.t1 MNKRESSFLNAAKLRTTLYIEEVLQKIAVMNFFSMFIVILALSLTSVVCDTGAEADIFVPNLNLQKELQDIRNQIYHEST IRLQFDKELSSMARRYRTLIVDQTNAKIENNKTKTALLKLEQSVQNLQQNTTEKLNKFETDVTSFALVFQTNKKAMNDSS KKVNILEAAFHELQRNFTESKIKLDTVSQTLQEAINTMNEQFAELNSSIVQMQSTTKEHSVRGNKYIHQLTDGRLCSLRI EMTDWKNKSAYAEYSTFRLDNETDGFKLHVGGFTGNRGNYMVQHNGMKFTTKDRDQDTYSSKNCAVFRSGAWWYYSCVAS NLNGDYNLREAARGVYWGGSYMKKTEMMLKCS |
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