Gene
| Gene Model ID | pfu_aug1.0_5244.1_30913 |
|---|---|
| Locus | scaffold5244.1 : 12224 ... 21785 : - |
| To GenomeBrowser | scaffold5244.1:12224..21785 |
| Genes list of scaffold | scaffold5244.1 |
| Synonym | pfu_aug2.0_374.1_14065 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5244.1_30913.t1 | gi|301603729|ref|XP_002931545.1| | PREDICTED: F-box/LRR-repeat protein 18 [Xenopus (Silurana) tropicalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5244.1_30913.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5244.1_30913.t1 atgaccaaagatgttatgctcacagacttcatcaaatgcagctgtcactacatcgagtcccttagtctcaatcattgcta ctggataacgggcaaaactatcgagacactgattcctaagtgtaaaaacattcgcaaactctcgcttctcgatattagcc ttacgacaaagagaatttgtaaaattctctcttcactgccaaagttagaagctttagctttcaccattggaaacattgat gattttgataatcatctgaattccaatgaatctgctcagaaacaaatgtgtcagataaaacatttaacaatacatttcaa agtggggatcacgcctaggactgaacaggcaatatcggtgcaatttattcagaaaaagacgtcttttttcgaacactgca ggaatttgactgaactcaacgttataggtcacccaaatttaggatgtgggcttccaaagcttctagttcaaccaaatgtg gtcaaaatagaaaatttaaaacacttaaaagtgctttcactcaattacgccatcgatccagcagccagaatattttacta cggaactttgctgtcagtggccaaacttcagttgaagttacacacagtattaaatccatcagcaaattttgaaaatcata tccgtaatgatttttggaggacattttggaactcccaagaagagctacggaatttagatttatcaaatacatcattaaag aatgtgttcccaacagtgtttgattcaacagttgtacgcaatagtttggtttatctgaacatctctgacacagacaacaa agactcgggtatgagtttacggacacttggacatgtctgtcctaatttacaggctttaaatgtgcggaacagccatctag tttatgtagcctctgaccagaatcccccacagcctgatcatgtgatacaacaaccacaaagcatgaacaactttgatata gatggtttctccaccctagtcaacttgtgccaaaacttagtccaccttaacataagtaacactcatatccaccagctaaa tgtgtcagacagattctgtcatgctctaacacagctaaaaggtctgcagtcgttagctgtgtcaccctgctgctttggta cacgaccagcgacgcaatcccatgattccaagacatcggagaaaacgggaatacagaatacagggatgaaacgtgcagca tcaaccatactaatgcagtacggaaaaaggaaaaggatagctcataacgcaggagtggatagtaacaatcagcctgtagc ctcaacctcctcagccgctgaccctgtggttgtcgaggacttgacccctgaccccgccttggatacagcctgtaaggacc ttaagcttctcagtctacggacgggactacagttactgacggacgcatgtacgaacctaactcactttgagctgattaac gcaggtttaatgcgaccagtcatacacagaggtcaaaatggtctcatgccaaagccttgcctttatataccatgtgccga gtcatacattgtgacggacagagagttgatgtatattagtaaactaaagaatctccgttatctacaactagctggtctgc caggtataataactgggtcgttcctatcagtgatagccaaggaatgcccaaagttaagccagttacatcttgcttacctc ggacttacagctcattgtatatacataggacagctttgtcaggcattctctcacttcactcacctacaggatctgaggtt agagcatgcctacctttctatagactcaatattctgtaaagctgcccagcgatgtacgagtttacaacgtctctgtgtcg tatctaaaaatggaagcatagactctggtgctgtcatagactttgtttctaagttaccttccttggtggtgctacaacta tttactgatgccacacagtatttgtgtaaaaagttacaaaaatctctcaaagaaagatttgagagttgccgtccggccct gagtgtcagtatatggcctttgtttgatcaagatacggcacacgtcatgaacaccataccaacaaaacacctagaagaac tgacaatattcagctccaaggttgcacaaagacctcataaacgattatga |
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Protein
| Protein ID | pfu_aug1.0_5244.1_30913.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5244.1_30913.t1 MTKDVMLTDFIKCSCHYIESLSLNHCYWITGKTIETLIPKCKNIRKLSLLDISLTTKRICKILSSLPKLEALAFTIGNID DFDNHLNSNESAQKQMCQIKHLTIHFKVGITPRTEQAISVQFIQKKTSFFEHCRNLTELNVIGHPNLGCGLPKLLVQPNV VKIENLKHLKVLSLNYAIDPAARIFYYGTLLSVAKLQLKLHTVLNPSANFENHIRNDFWRTFWNSQEELRNLDLSNTSLK NVFPTVFDSTVVRNSLVYLNISDTDNKDSGMSLRTLGHVCPNLQALNVRNSHLVYVASDQNPPQPDHVIQQPQSMNNFDI DGFSTLVNLCQNLVHLNISNTHIHQLNVSDRFCHALTQLKGLQSLAVSPCCFGTRPATQSHDSKTSEKTGIQNTGMKRAA STILMQYGKRKRIAHNAGVDSNNQPVASTSSAADPVVVEDLTPDPALDTACKDLKLLSLRTGLQLLTDACTNLTHFELIN AGLMRPVIHRGQNGLMPKPCLYIPCAESYIVTDRELMYISKLKNLRYLQLAGLPGIITGSFLSVIAKECPKLSQLHLAYL GLTAHCIYIGQLCQAFSHFTHLQDLRLEHAYLSIDSIFCKAAQRCTSLQRLCVVSKNGSIDSGAVIDFVSKLPSLVVLQL FTDATQYLCKKLQKSLKERFESCRPALSVSIWPLFDQDTAHVMNTIPTKHLEELTIFSSKVAQRPHKRL |
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