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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5252.1_52496
Locus scaffold5252.1 : 20816 ... 28174 : +
To GenomeBrowser scaffold5252.1:20816..28174
Genes list of scaffold scaffold5252.1
Synonym pfu_aug2.0_424.1_14136

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5252.1_52496.t1 1 1 Amidase_2 59 153 8.6e-18 64.6 7.5e-22 1.1e-17 64.3

Transcript
Transcript IDpfu_aug1.0_5252.1_52496.t1
Definition-
>pfu_aug1.0_5252.1_52496.t1
atgtataaatttcagtcaccgaaaatagtatcagtcaaactacatcgtatatgttcaacaacacgttttaacatgataca
tgtatacgtttttgtatcaaccgtcttactcacgatttcaacaattacaatggctgaagagtgtgcgtgtgcacttgccg
atgtaaacattcgttcaggagcaggatggtctgacattggttatagtttcatcataggagaagatggcaatgtctatgaa
ggcagagggtggcatgggattggcgctcatacatatggacacaatgttgatggcctaggtttttgtatcattggcaactt
catgaaagtaaaaccaaacgaggcagcactgaatgcaaccaagcagcttatctcttgtgccgtaactaatggttacataa
cagaagactatatactaaaaggacaccgtgacgtgggacagacagcttgtcccggagataagctgtacgagctgattcag
aaatggccacattatccacattag

Protein
Protein IDpfu_aug1.0_5252.1_52496.t1
Definition-
>pfu_aug1.0_5252.1_52496.t1
MYKFQSPKIVSVKLHRICSTTRFNMIHVYVFVSTVLLTISTITMAEECACALADVNIRSGAGWSDIGYSFIIGEDGNVYE
GRGWHGIGAHTYGHNVDGLGFCIIGNFMKVKPNEAALNATKQLISCAVTNGYITEDYILKGHRDVGQTACPGDKLYELIQ
KWPHYPH

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