Gene
| Gene Model ID | pfu_aug1.0_5257.1_09076 |
|---|---|
| Locus | scaffold5257.1 : 222 ... 18955 : - |
| To GenomeBrowser | scaffold5257.1:222..18955 |
| Genes list of scaffold | scaffold5257.1 |
| Synonym | pfu_aug2.0_259.1_30521 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5257.1_09076.t1 | 2 | 1 | MIB_HERC2 | 4 | 65 | 8.8e-25 | 86.4 | 1.5e-17 | 2.9e-14 | 52.7 |
| pfu_aug1.0_5257.1_09076.t1 | 2 | 2 | MIB_HERC2 | 68 | 119 | 8.8e-25 | 86.4 | 2.9e-13 | 5.5e-10 | 39.0 |
| pfu_aug1.0_5257.1_09076.t1 | 4 | 1 | Ank_4 | 303 | 343 | 2.0e-20 | 72.7 | 3.3e-06 | 0.0062 | 17.0 |
| pfu_aug1.0_5257.1_09076.t1 | 3 | 1 | Ank_2 | 304 | 387 | 1.2e-29 | 102.4 | 3.7e-16 | 6.8e-13 | 48.7 |
| pfu_aug1.0_5257.1_09076.t1 | 6 | 1 | Ank | 304 | 323 | 1.4e-26 | 90.9 | 0.0058 | 11.0 | 6.0 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 1 | Ank_5 | 312 | 364 | 1.1e-24 | 85.8 | 4.0e-11 | 7.4e-08 | 32.3 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 1 | Ank_3 | 325 | 353 | 5.5e-17 | 60.1 | 1.4e-05 | 0.027 | 14.6 |
| pfu_aug1.0_5257.1_09076.t1 | 6 | 2 | Ank | 326 | 356 | 1.4e-26 | 90.9 | 1.1e-06 | 0.002 | 17.8 |
| pfu_aug1.0_5257.1_09076.t1 | 4 | 2 | Ank_4 | 340 | 367 | 2.0e-20 | 72.7 | 0.00052 | 0.96 | 10.0 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 2 | Ank_5 | 352 | 400 | 1.1e-24 | 85.8 | 1.3e-07 | 0.00024 | 21.2 |
| pfu_aug1.0_5257.1_09076.t1 | 3 | 2 | Ank_2 | 359 | 412 | 1.2e-29 | 102.4 | 3.9e-07 | 0.00072 | 19.8 |
| pfu_aug1.0_5257.1_09076.t1 | 6 | 3 | Ank | 359 | 381 | 1.4e-26 | 90.9 | 0.0025 | 4.6 | 7.2 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 2 | Ank_3 | 359 | 385 | 5.5e-17 | 60.1 | 0.0022 | 4.1 | 7.9 |
| pfu_aug1.0_5257.1_09076.t1 | 4 | 3 | Ank_4 | 360 | 405 | 2.0e-20 | 72.7 | 4.5e-08 | 8.4e-05 | 22.9 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 3 | Ank_5 | 379 | 413 | 1.1e-24 | 85.8 | 0.00018 | 0.34 | 11.2 |
| pfu_aug1.0_5257.1_09076.t1 | 6 | 4 | Ank | 393 | 413 | 1.4e-26 | 90.9 | 0.0018 | 3.4 | 7.6 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 3 | Ank_3 | 393 | 406 | 5.5e-17 | 60.1 | 0.92 | 1700.0 | -0.2 |
| pfu_aug1.0_5257.1_09076.t1 | 3 | 3 | Ank_2 | 397 | 487 | 1.2e-29 | 102.4 | 5.6e-17 | 1.0e-13 | 51.3 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 4 | Ank_5 | 422 | 460 | 1.1e-24 | 85.8 | 2.2e-07 | 0.00041 | 20.4 |
| pfu_aug1.0_5257.1_09076.t1 | 6 | 5 | Ank | 426 | 451 | 1.4e-26 | 90.9 | 1.2e-08 | 2.2e-05 | 24.0 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 4 | Ank_3 | 428 | 450 | 5.5e-17 | 60.1 | 1.6e-06 | 0.003 | 17.6 |
| pfu_aug1.0_5257.1_09076.t1 | 4 | 4 | Ank_4 | 429 | 481 | 2.0e-20 | 72.7 | 8.0e-11 | 1.5e-07 | 31.7 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 5 | Ank_5 | 446 | 491 | 1.1e-24 | 85.8 | 2.2e-08 | 4.1e-05 | 23.6 |
| pfu_aug1.0_5257.1_09076.t1 | 6 | 6 | Ank | 462 | 488 | 1.4e-26 | 90.9 | 2.8e-08 | 5.1e-05 | 22.8 |
| pfu_aug1.0_5257.1_09076.t1 | 5 | 5 | Ank_3 | 463 | 487 | 5.5e-17 | 60.1 | 4.4e-06 | 0.0081 | 16.3 |
Transcript
| Transcript ID | pfu_aug1.0_5257.1_09076.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5257.1_09076.t1 atgtccgttggtcttcgagtggtacgaggtcccgactggaaccttggcaacaaagatcaaggtgaaggtcacgtaggaac cgttgtcaaggacaacggaaatgaaacataccatgtcgtatgggatatgggcgagcagacgacatgtcgaggcgggaaag atgggaaaagtgatcttatcattctggataatgccccggcaggtggcaacggacagaaagggaaggttgaagacgttcga aacttcggatcagttgcaggcgggagaaatgcagttcgcgtgcgttgggataaaactggagaagcaaatgtttatcgtgt gggttgtaaagggaaagtggacttgaaatgtgtcagtgagggaagtggtacctactactacaaagatcatctacctgtcc taggtaaatcagggtcttcaggcagcccaaatgcgtcacctcgatcaccggtaggcagagcggcaggcggagacaccttg ctgcagattggtgataaatgtgtcgtggacatgccggaggaggccctgaaagaggtgcagagaggtcacggaggctggag catcagaatgtctgagtgcatcggagaggttggaacaataaagggatttgttggtgattctgccattgaggtacaatacg acgataggagctaccagttctacgccggtgcagttagcaaggtgtacccaatccgtgttggagacgttgtaagagtgggt aaagatgaaaagaaagccatattattgcagaagaaccacggtggatggaatgcggacatgaaacaggtcatcccaatata tgaaattcagttttacatcaataaagggcaaggggcgtttaagattttctccacatgtccactgttcaacgcattactgc gggtgcggtcctctatgatcagcgcaaggaaagaagaagacattgctgttttgttgataaaaaataaagctaatgtacat atcaccgacgccaatcagcgatcacctgcacacgctgctgcttataatgggctctgtcctgtgttaaagatcatattaga agctggtgccaacaccaatgcacaggacagcgttggtgacacaccccttcacgacgcaatagagaaaagaagtgaccgtg cagtggctattattttgtcgcatccaaaaattgacctgaaactaaccaataaaaaaggatttaatcctctgatttgggcg gcattcaagggacatgactttgccgtggagagaatagttgggaaagcccctcatctggtcgatatccagaaagaagacaa atttactgcccttcatgttgctgctattaataaccacttagagatagccagtattttgttacttaagggcaaagcgaagg tagatctacgtaacaccaatgctatgacaccctgtcatctggcggcgtacgaaggccacgctgagatggtcaaagtactt gtcgagaatggtaagaagatttatctagttacaaggcaaatcaatcatgtaaagagagactccccaacaagactccacat catccacagcaaagcaccgaaactccacaacttcacaagcgaataccggtaa |
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Protein
| Protein ID | pfu_aug1.0_5257.1_09076.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5257.1_09076.t1 MSVGLRVVRGPDWNLGNKDQGEGHVGTVVKDNGNETYHVVWDMGEQTTCRGGKDGKSDLIILDNAPAGGNGQKGKVEDVR NFGSVAGGRNAVRVRWDKTGEANVYRVGCKGKVDLKCVSEGSGTYYYKDHLPVLGKSGSSGSPNASPRSPVGRAAGGDTL LQIGDKCVVDMPEEALKEVQRGHGGWSIRMSECIGEVGTIKGFVGDSAIEVQYDDRSYQFYAGAVSKVYPIRVGDVVRVG KDEKKAILLQKNHGGWNADMKQVIPIYEIQFYINKGQGAFKIFSTCPLFNALLRVRSSMISARKEEDIAVLLIKNKANVH ITDANQRSPAHAAAYNGLCPVLKIILEAGANTNAQDSVGDTPLHDAIEKRSDRAVAIILSHPKIDLKLTNKKGFNPLIWA AFKGHDFAVERIVGKAPHLVDIQKEDKFTALHVAAINNHLEIASILLLKGKAKVDLRNTNAMTPCHLAAYEGHAEMVKVL VENGKKIYLVTRQINHVKRDSPTRLHIIHSKAPKLHNFTSEYR |
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