Gene
| Gene Model ID | pfu_aug1.0_5265.1_09081 |
|---|---|
| Locus | scaffold5265.1 : 15486 ... 22755 : - |
| To GenomeBrowser | scaffold5265.1:15486..22755 |
| Genes list of scaffold | scaffold5265.1 |
| Synonym | pfu_aug2.0_421.1_04137 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5265.1_09081.t1 | 2 | 1 | Ribosomal_L24e | 1 | 71 | 5.3e-33 | 112.6 | 7.2e-37 | 5.3e-33 | 112.6 |
| pfu_aug1.0_5265.1_09081.t1 | 2 | 2 | Ribosomal_L24e | 88 | 106 | 5.3e-33 | 112.6 | 0.21 | 1600.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5265.1_09081.t1 | gi|161669228|gb|ABX75466.1| | ribosomal protein l24 [Lycosa singoriensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5265.1_09081.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5265.1_09081.t1 atgaagatcgaactgtgttcgtacagtggttacaaaatctaccctggtcatgggaaacgaatggttaaaactgatggaag ggtgttccaattcttgaacggaaaatgtgaagcttcacatttaatgaagagaaaccctcgtgaaatcagctggacagttt tatatagaaggaaacacaagaagggtcaaactgaggaggtgtcaaagaaaaggaccagaaggacacagaaattcacacgt gctatcacaggggcctcactcacagacatcttagccaagagaaaccagaagccagaggtccgaaaagctcagagagaaca agccattaggtttcacagcctaaacaacagaaagctccaaaaatggcacagaaaggtggaactaagccacgtgtcggtgg aaaacgataaacttactctgtgcatataa |
|
Protein
| Protein ID | pfu_aug1.0_5265.1_09081.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5265.1_09081.t1 MKIELCSYSGYKIYPGHGKRMVKTDGRVFQFLNGKCEASHLMKRNPREISWTVLYRRKHKKGQTEEVSKKRTRRTQKFTR AITGASLTDILAKRNQKPEVRKAQREQAIRFHSLNNRKLQKWHRKVELSHVSVENDKLTLCI |
|