Gene
| Gene Model ID | pfu_aug1.0_52765.1_63424 |
|---|---|
| Locus | scaffold52765.1 : 1 ... 4218 : + |
| To GenomeBrowser | scaffold52765.1:1..4218 |
| Genes list of scaffold | scaffold52765.1 |
| Synonym | pfu_aug2.0_879.1_31247 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_52765.1_63424.t1 | 1 | 1 | SRCR | 281 | 320 | 7.8e-08 | 32.5 | 3.8e-11 | 1.9e-07 | 31.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_52765.1_63424.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_52765.1_63424.t1 agagaattgttggcgctacagagacggtagctgacgaccaagatcgtatacgggaggatatcaagctgtttatggaggta caaacaaacaacaccgccaaatgtggtaataaagtcaccgagaaccaacgcagtgcaattcatgatggtgagattagcaa cgaaataagcccggtagtggagaattttccaggaaagaccgacgacaaatcgaaagtagaaagtgaaagagctcagcata tcctcgacgaagtgataaatatatcaaacgccactaccaaagcagtagagatgttacatgatctagcaaaaatgaatcaa gagtcgaccaaatcaagtattttcaatttagaaaatgaagtgtcaaaactccgcgaaatcagagaacattcggaaaacat cactcaccatcctaatcttttgaccgggcttgccgaatttaatttggaagaattatcaaatacaagtaaagctatttata caatggtcgaggctatagcatcaaacactggctggattccatacatattccacaatttacaatttgttgaagttcaagtg aaccagactttactgacatctaaagcggcattaaaacgagcaattctacacgacaccattcaagctaaagtgtctgttca atatgaaccaaaagctacagctgcgcctcctgtggctgaacctgtggcgacgtctgccagttgtgagaaaactgattacg tcaatgatacgtcatcgttggtcaaggaactgaggtttgtccataaaacaaaccaaagaattcatcgtttgattcctgcc cttacaaaactgctcggagaaccagagccatttttcacgcttgttgatggagacagcgataatcaaggtagaatagaggt ttacaggagaggttactggggaactatatgtgaccctctgtcacacgtacaggcatcctatatatgtaggcatcttggat acttag |
|
Protein
| Protein ID | pfu_aug1.0_52765.1_63424.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_52765.1_63424.t1 RIVGATETVADDQDRIREDIKLFMEVQTNNTAKCGNKVTENQRSAIHDGEISNEISPVVENFPGKTDDKSKVESERAQHI LDEVINISNATTKAVEMLHDLAKMNQESTKSSIFNLENEVSKLREIREHSENITHHPNLLTGLAEFNLEELSNTSKAIYT MVEAIASNTGWIPYIFHNLQFVEVQVNQTLLTSKAALKRAILHDTIQAKVSVQYEPKATAAPPVAEPVATSASCEKTDYV NDTSSLVKELRFVHKTNQRIHRLIPALTKLLGEPEPFFTLVDGDSDNQGRIEVYRRGYWGTICDPLSHVQASYICRHLGY L |
|