Gene
Gene Model ID | pfu_aug1.0_5308.1_67215 |
---|---|
Locus | scaffold5308.1 : 17166 ... 21745 : + |
To GenomeBrowser | scaffold5308.1:17166..21745 |
Genes list of scaffold | scaffold5308.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | C1q domain containing protein |
Description | Best hit to FR715599 (MgC1q20). 82 bits, 5e-14 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5308.1_67215.t1 | 1 | 1 | C1q | 25 | 131 | 1.5e-21 | 76.7 | 1.2e-25 | 1.8e-21 | 76.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5308.1_67215.t1 | gi|325504339|emb|CBX41669.1| | putative C1q domain containing protein MgC1q20 [Mytilus galloprovincialis] | 4.0e-14 |
Transcript
Transcript ID | pfu_aug1.0_5308.1_67215.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5308.1_67215.t1 atgccagaacgtgaaggacgactcttgctagggagtcctgatgtttctcatcaatcacacacatcgggagtcgccttcta cgctagactcatgaaggcgtacagctcgctgggagaacgggagaccgtcatatttgaccaagttgtgaccaacgtgggaa gtggttacgatgtcaacaatgggatattcttttgtccaatcaacgggatttatatatttgcagcaacgatggcatcggca gacaacaacaaaaatctggatgcagaaattgttcatcaaggcaagactgttgctcgtcttcatgcaactgtttatgggta tgacatggggtcacaggtcgctatggttcaatgtcaacagggggagaaggtctggatacggcacatggagtcagcagggg attctaaaatcgtacccgcgggttacagnaaaggaagaaagaaagaaagtggcatatga |
Protein
Protein ID | pfu_aug1.0_5308.1_67215.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5308.1_67215.t1 MPEREGRLLLGSPDVSHQSHTSGVAFYARLMKAYSSLGERETVIFDQVVTNVGSGYDVNNGIFFCPINGIYIFAATMASA DNNKNLDAEIVHQGKTVARLHATVYGYDMGSQVAMVQCQQGEKVWIRHMESAGDSKIVPAGYXKGRKKESGI |