Gene
| Gene Model ID | pfu_aug1.0_5308.1_67215 |
|---|---|
| Locus | scaffold5308.1 : 17166 ... 21745 : + |
| To GenomeBrowser | scaffold5308.1:17166..21745 |
| Genes list of scaffold | scaffold5308.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to FR715599 (MgC1q20). 82 bits, 5e-14 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5308.1_67215.t1 | 1 | 1 | C1q | 25 | 131 | 1.5e-21 | 76.7 | 1.2e-25 | 1.8e-21 | 76.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5308.1_67215.t1 | gi|325504339|emb|CBX41669.1| | putative C1q domain containing protein MgC1q20 [Mytilus galloprovincialis] | 4.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_5308.1_67215.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5308.1_67215.t1 atgccagaacgtgaaggacgactcttgctagggagtcctgatgtttctcatcaatcacacacatcgggagtcgccttcta cgctagactcatgaaggcgtacagctcgctgggagaacgggagaccgtcatatttgaccaagttgtgaccaacgtgggaa gtggttacgatgtcaacaatgggatattcttttgtccaatcaacgggatttatatatttgcagcaacgatggcatcggca gacaacaacaaaaatctggatgcagaaattgttcatcaaggcaagactgttgctcgtcttcatgcaactgtttatgggta tgacatggggtcacaggtcgctatggttcaatgtcaacagggggagaaggtctggatacggcacatggagtcagcagggg attctaaaatcgtacccgcgggttacagnaaaggaagaaagaaagaaagtggcatatga |
|
Protein
| Protein ID | pfu_aug1.0_5308.1_67215.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5308.1_67215.t1 MPEREGRLLLGSPDVSHQSHTSGVAFYARLMKAYSSLGERETVIFDQVVTNVGSGYDVNNGIFFCPINGIYIFAATMASA DNNKNLDAEIVHQGKTVARLHATVYGYDMGSQVAMVQCQQGEKVWIRHMESAGDSKIVPAGYXKGRKKESGI |
|