Gene
| Gene Model ID | pfu_aug1.0_53168.1_12793 |
|---|---|
| Locus | scaffold53168.1 : 112 ... 4201 : - |
| To GenomeBrowser | scaffold53168.1:112..4201 |
| Genes list of scaffold | scaffold53168.1 |
| Synonym | pfu_aug2.0_2341.1_05493 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_53168.1_12793.t1 | 2 | 1 | ALIX_LYPXL_bnd | 3 | 74 | 2.4e-24 | 85.8 | 1.4e-21 | 2.0e-17 | 63.0 |
| pfu_aug1.0_53168.1_12793.t1 | 2 | 2 | ALIX_LYPXL_bnd | 100 | 150 | 2.4e-24 | 85.8 | 3.1e-09 | 4.5e-05 | 22.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_53168.1_12793.t1 | gi|260829229|ref|XP_002609564.1| | hypothetical protein BRAFLDRAFT_129885 [Branchiostoma floridae] | 3.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_53168.1_12793.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_53168.1_12793.t1 agcataaatatgctggatgaggaagagaagtcagacaaccagcttagggagcagttcaaagaaaaatggagtcgtactcc gtcggacaaacttacaaaaccgatgaaagacgagagcatgaaataccgacagatcttagatacagccattcacgctgaca aagtcgttcaggagaagtatatgaaacacaaacctgccatagacatactgtcaaaatctccattttccggacttctcttg gctgttgcagataataaactcgtgaaaagagattcagaaatttacgccgccgccggtaaattctttgctgccttagcgtc tgatgggttgattaacgaagagtccatatcaatagaagaattagacagaacctacggccctctcagggagcaggtcacag ccagtatacaaagacaagaaacactgatggctagagtacaggttagtgtcaactactag |
|
Protein
| Protein ID | pfu_aug1.0_53168.1_12793.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_53168.1_12793.t1 SINMLDEEEKSDNQLREQFKEKWSRTPSDKLTKPMKDESMKYRQILDTAIHADKVVQEKYMKHKPAIDILSKSPFSGLLL AVADNKLVKRDSEIYAAAGKFFAALASDGLINEESISIEELDRTYGPLREQVTASIQRQETLMARVQVSVNY |
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