Gene
| Gene Model ID | pfu_aug1.0_53195.1_05529 |
|---|---|
| Locus | scaffold53195.1 : 5 ... 3758 : + |
| To GenomeBrowser | scaffold53195.1:5..3758 |
| Genes list of scaffold | scaffold53195.1 |
| Synonym | pfu_aug2.0_46.1_20108 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_53195.1_05529.t1 | 6 | 1 | LRR_6 | 1 | 25 | 1.0e-17 | 62.1 | 4.7e-06 | 0.0099 | 15.8 |
| pfu_aug1.0_53195.1_05529.t1 | 2 | 1 | LRR_8 | 2 | 39 | 3.8e-08 | 32.9 | 0.00036 | 0.76 | 9.5 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 1 | LRR_4 | 2 | 38 | 3.7e-07 | 29.6 | 0.00029 | 0.61 | 9.7 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 1 | LRR_1 | 3 | 17 | 1.2e-09 | 36.8 | 0.00019 | 0.39 | 10.9 |
| pfu_aug1.0_53195.1_05529.t1 | 6 | 2 | LRR_6 | 29 | 51 | 1.0e-17 | 62.1 | 2.4e-06 | 0.0051 | 16.7 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 2 | LRR_1 | 29 | 41 | 1.2e-09 | 36.8 | 0.034 | 72.0 | 4.0 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 2 | LRR_4 | 55 | 68 | 3.7e-07 | 29.6 | 0.069 | 150.0 | 2.1 |
| pfu_aug1.0_53195.1_05529.t1 | 6 | 3 | LRR_6 | 56 | 72 | 1.0e-17 | 62.1 | 0.00054 | 1.1 | 9.4 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 3 | LRR_1 | 56 | 71 | 1.2e-09 | 36.8 | 0.088 | 190.0 | 2.7 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 3 | LRR_4 | 56 | 94 | 3.7e-07 | 29.6 | 0.014 | 30.0 | 4.3 |
| pfu_aug1.0_53195.1_05529.t1 | 2 | 2 | LRR_8 | 80 | 137 | 3.8e-08 | 32.9 | 3.4e-08 | 7.1e-05 | 22.4 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 4 | LRR_4 | 80 | 119 | 3.7e-07 | 29.6 | 0.0001 | 0.21 | 11.2 |
| pfu_aug1.0_53195.1_05529.t1 | 6 | 4 | LRR_6 | 81 | 98 | 1.0e-17 | 62.1 | 0.00027 | 0.57 | 10.4 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 4 | LRR_1 | 81 | 107 | 1.2e-09 | 36.8 | 0.0032 | 6.8 | 7.1 |
| pfu_aug1.0_53195.1_05529.t1 | 6 | 5 | LRR_6 | 104 | 124 | 1.0e-17 | 62.1 | 0.00027 | 0.57 | 10.4 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 5 | LRR_4 | 105 | 137 | 3.7e-07 | 29.6 | 9.8e-06 | 0.021 | 14.4 |
| pfu_aug1.0_53195.1_05529.t1 | 5 | 5 | LRR_1 | 106 | 123 | 1.2e-09 | 36.8 | 0.00022 | 0.46 | 10.7 |
| pfu_aug1.0_53195.1_05529.t1 | 6 | 6 | LRR_6 | 129 | 138 | 1.0e-17 | 62.1 | 0.48 | 1000.0 | 0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_53195.1_05529.t1 | gi|307215039|gb|EFN89866.1| | F-box/LRR-repeat protein 14 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_53195.1_05529.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_53195.1_05529.t1 atgccaagtctccgtgagcttaatctcagaagctgtgataacataagtgacactggtattggataccttgctgaaagtgg gtcaagattaacaaagttggatgtaagtttttgtgacaaagtgggagatcaaggacttgtctttcttgcgcaaggattat ttggactacagagtataagcttatgtgcttgcaatataagtgatgagggaatttgtcgcttggtgtgtgctcttcatgaa ctaacaacactgaacattggtcagtgtgtccgcatcactgacaaaggacttggaataatagctgaccatttaaaaaacct gcagtcaatagatttgtatggatgtactcgtattacaactgttggccttgaaagaataatgcaactcagaaatttgtctg ccctaaatttaggactttggcataaaagatga |
|
Protein
| Protein ID | pfu_aug1.0_53195.1_05529.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_53195.1_05529.t1 MPSLRELNLRSCDNISDTGIGYLAESGSRLTKLDVSFCDKVGDQGLVFLAQGLFGLQSISLCACNISDEGICRLVCALHE LTTLNIGQCVRITDKGLGIIADHLKNLQSIDLYGCTRITTVGLERIMQLRNLSALNLGLWHKR |
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