Gene
| Gene Model ID | pfu_aug1.0_532.1_65500 |
|---|---|
| Locus | scaffold532.1 : 3026 ... 12005 : - |
| To GenomeBrowser | scaffold532.1:3026..12005 |
| Genes list of scaffold | scaffold532.1 |
| Synonym | pfu_aug2.0_1120.1_01396 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_532.1_65500.t1 | 2 | 1 | AAA | 12 | 22 | 2.3e-11 | 44.0 | 0.86 | 6400.0 | -2.8 |
| pfu_aug1.0_532.1_65500.t1 | 2 | 2 | AAA | 116 | 167 | 2.3e-11 | 44.0 | 8.1e-15 | 6.0e-11 | 42.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_532.1_65500.t1 | gi|56755741|gb|AAW26049.1| | SJCHGC06030 protein [Schistosoma japonicum] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_532.1_65500.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_532.1_65500.t1 atgatcacttccgtgagagaaaatgccaaggaattaaacaaacagtttgacaagtctgaaaatgatctgaaagctttaca gagtgtaggacagattgttggtgaagtattaaagcagttgacagaagacaaatttattgtgaaggctactaatggtccca gatacgttgttggatgtcgtaggcagttagacaagagtaaactgaaaccgggcacacgagtggcgctagatatgactaca ctcacggtcatgagatacttaccgagagaggtggatccattggtgtataacatgtctatagaggatccaggtgatgtcag ctataaccagatcggaggattgggagaacagatacgagaactcagagagctgttaaaccagatggatgggtttgatgctt taggacaagttaagatgataatggccacgaacagaccagatacattagacccagctttacttagacctggaagactcgat agaaaaatagagattcctcttccaaatgaacagtctaggctagaaatcctaaagattcacgcacaaccaatagcaaaaca tggagaaattgactgggaagcagttgtaaagctgtctgatgatttcaatggtgcagatctgagaaatgtgtgtacagaag caggtatgtttgccataagagcagagagagattatgtgattgaggaggactttatgaaagcagtaaggaaagttgctgat aacaagaaactggaatcaaagcttgactacaaacctatctaa |
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Protein
| Protein ID | pfu_aug1.0_532.1_65500.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_532.1_65500.t1 MITSVRENAKELNKQFDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTT LTVMRYLPREVDPLVYNMSIEDPGDVSYNQIGGLGEQIRELRELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLD RKIEIPLPNEQSRLEILKIHAQPIAKHGEIDWEAVVKLSDDFNGADLRNVCTEAGMFAIRAERDYVIEEDFMKAVRKVAD NKKLESKLDYKPI |
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