Gene
| Gene Model ID | pfu_aug1.0_5330.1_01953 |
|---|---|
| Locus | scaffold5330.1 : 6556 ... 28395 : + |
| To GenomeBrowser | scaffold5330.1:6556..28395 |
| Genes list of scaffold | scaffold5330.1 |
| Synonym | pfu_aug2.0_501.1_04254 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5330.1_01953.t1 | 4 | 1 | WD40 | 52 | 87 | 1.3e-24 | 85.1 | 6.0e-12 | 2.2e-08 | 33.6 |
| pfu_aug1.0_5330.1_01953.t1 | 4 | 2 | WD40 | 97 | 134 | 1.3e-24 | 85.1 | 2.1e-08 | 7.9e-05 | 22.3 |
| pfu_aug1.0_5330.1_01953.t1 | 4 | 3 | WD40 | 200 | 226 | 1.3e-24 | 85.1 | 0.004 | 15.0 | 5.6 |
| pfu_aug1.0_5330.1_01953.t1 | 4 | 4 | WD40 | 231 | 268 | 1.3e-24 | 85.1 | 3.6e-10 | 1.3e-06 | 28.0 |
Transcript
| Transcript ID | pfu_aug1.0_5330.1_01953.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5330.1_01953.t1 atgggatacgcagtactagtaacggcttgggtggaccccaatccagatatcagcagactagagagtaatgacttgaagca ggagattttagagaggtcgggaaggacggtcaaacggaggcgaacacatcaacctacagtattacatatgctacaaaaca tagactcccacgatgacgatgtgaatgccgtagcgttcgctgacgattcctcacatatcctctttagtggtggtgacgat ggattagttagggtatgggacaggagaacgttgagagaggacgaccctgaaccttgtggtgtaatggccgggcatactga tggtattacctatattgattccaagggtgatgcccgatatcttatcactaattccaaagatcagacgatgaaactctggg atatgagaaaattctcctcttcagatgccattgaggtctatgagaaaatcatcaccgactcttgcgcatgtatacctcga aatgctaatactatagctaggattttctttacttcagtgacaagaaggaaatctatagaaggggatacctctataatgac atatcgtggacattctgtattacacacgctgatccgttgtcacttctcgccggaatctactaccggacaaagatacgtct actctggttgtgcaagtggtgcattagttatttacgacatactgacggggaagatggtgtccaagctcactggtcataaa tcgtgtaccagggacgtgtcatggcatccatatcagaataccatagtctgcacttcttgggatggtacaatatcaaaatg ggactatgttcacgaagatccagaagaatcggacgaatcttcatccagtgatgatgaagatgacagtgaagattacatgg tggcaagaagacgcagtaaacgacatgcgcggcaggaaaaaatcttcaaacggaacatggtcactannnnnnnnttacat ttcatataa |
|
Protein
| Protein ID | pfu_aug1.0_5330.1_01953.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5330.1_01953.t1 MGYAVLVTAWVDPNPDISRLESNDLKQEILERSGRTVKRRRTHQPTVLHMLQNIDSHDDDVNAVAFADDSSHILFSGGDD GLVRVWDRRTLREDDPEPCGVMAGHTDGITYIDSKGDARYLITNSKDQTMKLWDMRKFSSSDAIEVYEKIITDSCACIPR NANTIARIFFTSVTRRKSIEGDTSIMTYRGHSVLHTLIRCHFSPESTTGQRYVYSGCASGALVIYDILTGKMVSKLTGHK SCTRDVSWHPYQNTIVCTSWDGTISKWDYVHEDPEESDESSSSDDEDDSEDYMVARRRSKRHARQEKIFKRNMVTXXXLH FI |
|