Gene
| Gene Model ID | pfu_aug1.0_53336.1_41573 |
|---|---|
| Locus | scaffold53336.1 : 1 ... 4125 : - |
| To GenomeBrowser | scaffold53336.1:1..4125 |
| Genes list of scaffold | scaffold53336.1 |
| Synonym | pfu_aug2.0_3416.1_22370 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_53336.1_41573.t1 | 2 | 1 | Cadherin | 2 | 79 | 7.9e-28 | 96.5 | 6.9e-17 | 3.4e-13 | 49.6 |
| pfu_aug1.0_53336.1_41573.t1 | 2 | 2 | Cadherin | 95 | 152 | 7.9e-28 | 96.5 | 1.6e-15 | 7.7e-12 | 45.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_53336.1_41573.t1 | gi|241735373|ref|XP_002413935.1| | conserved hypothetical protein [Ixodes scapularis] | 1.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_53336.1_41573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_53336.1_41573.t1 atggtttcggcgacagatcaaaacagaggagaaaatggagtggtagaatactacatcatagaggaccagaaaaataccgc agcgttattctctataaacaatatgacaggtgaattggtaacgagtgccagacttgatcgggagactcagagctctagga atctgttcatcaccgttcgagccgtggaccgtggaaatcctccgttagacgactattgtacatttgccatcacagtcggc gatgtcaatgataatgatcccattttcaggtcaaatcagtatacaggtcagattttaaaagcagcctctgtaggtacagt agtacttactgttcaagcggacgacagcgatctgggaatgaacgcggccattcagtactcaatcacctccaatcccggag attacttcaggatggataaggacaccggtgaaatttctgttaacagatcattgaatacagcgtgttctaggattccattt cctgttaccccaggttag |
|
Protein
| Protein ID | pfu_aug1.0_53336.1_41573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_53336.1_41573.t1 MVSATDQNRGENGVVEYYIIEDQKNTAALFSINNMTGELVTSARLDRETQSSRNLFITVRAVDRGNPPLDDYCTFAITVG DVNDNDPIFRSNQYTGQILKAASVGTVVLTVQADDSDLGMNAAIQYSITSNPGDYFRMDKDTGEISVNRSLNTACSRIPF PVTPG |
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