Gene
| Gene Model ID | pfu_aug1.0_5362.1_09108 |
|---|---|
| Locus | scaffold5362.1 : 5246 ... 37184 : + |
| To GenomeBrowser | scaffold5362.1:5246..37184 |
| Genes list of scaffold | scaffold5362.1 |
| Synonym | pfu_aug2.0_690.1_01054 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5362.1_09108.t1 | 2 | 1 | Integrin_alpha2 | 292 | 438 | 8.4e-29 | 100.7 | 1.3e-26 | 6.5e-23 | 81.2 |
| pfu_aug1.0_5362.1_09108.t1 | 2 | 2 | Integrin_alpha2 | 456 | 579 | 8.4e-29 | 100.7 | 8.8e-09 | 4.4e-05 | 22.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5362.1_09108.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5362.1_09108.t1 atgtgtcctaacgttggtagaaatgaatggcaaatcagagatagtggtggtgccacggtccaactttacgcaagcgcatt gcttggatttagtttgacaacgagtccaatctgtgcaccattatggaagaatttaaaagattatcagtcaagtagatatt acaatccagtcggacattgttatgaactgccgaattcagatttgacaaatgtcacgtcgaagttttttcgtataagtaga aatgaatggctaacatttgataatagtagtgcaactgtacatctatacgcaagtgcattgcttggatttagtttaacaac tagtccagtttgtgcaccgctttggaaagatctgcgaagatattcttccgcacagtcttacttggcttacggcgcatgtc acgaactagacaaatcgaatttagagtcagtcactcctaaatatttcgatattgataatgcggacctgtttcgattcgga acaaactttatggctacagccatatttggttttagcttggcccgtacaaatataaaactcttcattattttgtcaatagg aggattttctttgtacaaggaggatgacgacagtactggctttgtggataaattaacagtgagggattcaccagacaccg ataacactatgacgtcaggatcgtatatgggttacgcagtggcatccgggcgtttcggaagcggactgacgccgatgccg caagtcgtggtaggatctcccggatacactagttccaacggaccggttggcgcggtaacactattggagacgtttctttc caccattagtccgcgagcacaacaaagaaagcagttcgtaggcagagagactttagaccgctatttcttccaatcaatag cagaacagcttgtgttctcagtcaacttcgagttaagtaacagttccgacagtgttacgccagtgttagctaacgacatc gctaaagaacgcactatgactacaaaatttgataccggttgcgccaccacttgtaactcaaatctaaagatagacatgtc catggacaatcaggatgtcattttgggagaaaccagagaaatcgttgtcagagtcacaataagtaacatgggagagcctg catacgctgcatccgtcatcattgaaccatcggccaacacggcgttcaggggatttgaccaggacacatctatcaataat gtccgagtgtcctgctccaggcttgagaacagaacaacagtccagtgtgatttccaaactccgatcctaatcaatatcag agggacgttcagtgttcggtttgatgcctccagagaacgcatactgcctcagaattctaactctacagtattcagccaaa gcatacaaattaacgccaccgcaaagtttacagtgtccaggaacagctacatcagctttacccagcggtacacagtggac aataacggaccaagcccttcccccggggctatgatctatatagacctacccgtaagatccacggacgagatgaagtacct gaccaccaggaatgccatcaagataagaacagactctgaatccgattcatgtagcgttgtgtcattcccgaatagagtaa aacgtgaaaccatgccagaggttccggaaacgtcaaagcttactaccgatgagaagtaccaggatgttgcttgctcaaga attacagagaaagacgaaaaataccagctgaaatacgactgtgccaggataagatgcatggtcagtttcttagagtacaa acagttcagaaatatagaaattactctcaacttgacggagtctgctctacctggaattatacagggatcatcttttgtga ggtattttactgaggccactgtctatcctcccgtcaacttaaatattccttatgaacaaacaaggaacaccactgcattt gcatccatggacgtattccctatcgtggtggaagctcaaacagaaccactcaatatctggattatcattggcggatcagt gggtggattgctcttcttaatcattataggaatcattctgtggaaggtataa |
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Protein
| Protein ID | pfu_aug1.0_5362.1_09108.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5362.1_09108.t1 MCPNVGRNEWQIRDSGGATVQLYASALLGFSLTTSPICAPLWKNLKDYQSSRYYNPVGHCYELPNSDLTNVTSKFFRISR NEWLTFDNSSATVHLYASALLGFSLTTSPVCAPLWKDLRRYSSAQSYLAYGACHELDKSNLESVTPKYFDIDNADLFRFG TNFMATAIFGFSLARTNIKLFIILSIGGFSLYKEDDDSTGFVDKLTVRDSPDTDNTMTSGSYMGYAVASGRFGSGLTPMP QVVVGSPGYTSSNGPVGAVTLLETFLSTISPRAQQRKQFVGRETLDRYFFQSIAEQLVFSVNFELSNSSDSVTPVLANDI AKERTMTTKFDTGCATTCNSNLKIDMSMDNQDVILGETREIVVRVTISNMGEPAYAASVIIEPSANTAFRGFDQDTSINN VRVSCSRLENRTTVQCDFQTPILINIRGTFSVRFDASRERILPQNSNSTVFSQSIQINATAKFTVSRNSYISFTQRYTVD NNGPSPSPGAMIYIDLPVRSTDEMKYLTTRNAIKIRTDSESDSCSVVSFPNRVKRETMPEVPETSKLTTDEKYQDVACSR ITEKDEKYQLKYDCARIRCMVSFLEYKQFRNIEITLNLTESALPGIIQGSSFVRYFTEATVYPPVNLNIPYEQTRNTTAF ASMDVFPIVVEAQTEPLNIWIIIGGSVGGLLFLIIIGIILWKV |
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