Gene
| Gene Model ID | pfu_aug1.0_537.1_07549 |
|---|---|
| Locus | scaffold537.1 : 7826 ... 18449 : + |
| To GenomeBrowser | scaffold537.1:7826..18449 |
| Genes list of scaffold | scaffold537.1 |
| Synonym | pfu_aug2.0_223.1_10466 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_537.1_07549.t1 | 1 | 1 | dsrm | 108 | 161 | 1.6e-09 | 38.2 | 2.2e-13 | 3.2e-09 | 37.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_537.1_07549.t1 | gi|327270557|ref|XP_003220056.1| | PREDICTED: double-stranded RNA-specific editase 1 isoform X2 [Anolis carolinensis] | 9.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_537.1_07549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_537.1_07549.t1 atgccagcatacaaacgtcagtacgagaaacaggaatttcggggaaaagattggatggaccatgacacaaaagaggcatc ggctcaggggtttccttctaaggtggaatttgacataaaagaggaatcggatccagaattttcatttaataaaaatttca atgccaaaattgatcctgacccaaactttaaaatggaaaggaaagtcatactgaagtctgaaatgtccgcagaggaaagt aactccaatactggcaaccaggtggcagcaccatccgtacagaaggtaacggacaaacaaccagtgatgtaccttaatga gctgcgtaacggtttgaagtatcatctggtaggagaggaggaggtcaataaggagaccatgtttacaataggagtcaccg tggacaagaaaatatttcaagggacggcaaaaagcaaaaaattagcaaaagctgaggcagcaaaggaagcgctgctcaaa ttgtttaatgttgtacatgatccagtaaattatcaattcaagtacgcaaatctcaaattcattttttcagatttggagaa gaaactgaaacagcaggggtcagatgtcaaggtcacaggaccttga |
|
Protein
| Protein ID | pfu_aug1.0_537.1_07549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_537.1_07549.t1 MPAYKRQYEKQEFRGKDWMDHDTKEASAQGFPSKVEFDIKEESDPEFSFNKNFNAKIDPDPNFKMERKVILKSEMSAEES NSNTGNQVAAPSVQKVTDKQPVMYLNELRNGLKYHLVGEEEVNKETMFTIGVTVDKKIFQGTAKSKKLAKAEAAKEALLK LFNVVHDPVNYQFKYANLKFIFSDLEKKLKQQGSDVKVTGP |
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