Gene
| Gene Model ID | pfu_aug1.0_5375.1_30945 |
|---|---|
| Locus | scaffold5375.1 : 15606 ... 20103 : + |
| To GenomeBrowser | scaffold5375.1:15606..20103 |
| Genes list of scaffold | scaffold5375.1 |
| Synonym | pfu_aug2.0_3569.1_32498 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5375.1_30945.t2 | 1 | 1 | SAM_PNT | 171 | 251 | 8.9e-13 | 47.8 | 2.4e-16 | 1.8e-12 | 46.8 |
| pfu_aug1.0_5375.1_30945.t2 | 1 | 1 | Ets | 340 | 423 | 4.7e-35 | 119.5 | 1.3e-38 | 9.8e-35 | 118.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 2 |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5375.1_30945.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5375.1_30945.t1 atggataatctaacagaccagaaagtacctcaaactcacttcatgacaggatgcgaagaaataatgttctcagcccccgc aactagtatgtcacaattaccattgactgtaacagagtttatcgatataggtgatttggctccccttggaccaaacatca tgagtaacgtcactgatgtaagagaaatcacacaaaactgtacaagtgctaaaagtgtaactgaccagcgcctgcttggt tcagagagtcctaagagttttctggatttagacactgtcaatgaacaagacatatctttgtatgaccatactgtgaacat caaagaagaaaaaatgtatgtaaactgtgtttccgagcagctatcccccacattccagtatccgtatgattacagtttat tacaaacggacaattatcaaccaccctcttctccagaggagtatcatgatattaaaacagagcatcctgagcccgacttg tccgagactatagtcagagcattaaagagggagataaatgaagtctgtaaaacactggaaatacagcaagatcctatgag ttggagtgtagaagatgccagaaaatggctaatgtggcatctaggacatgattatcagacttctcaaggcgtcttagagc agttcaattttaagggcagcgagctgtgcgctctgacagccgatgaatttcagatgaaatctcttgaatggggaaagaat cttcatgcacaacttgatgtatggaaaaatgcttgtaaattgtgtgggccagtcatacagcagacaacacaaacgtatga cccatgtcaaatgttcaatgtgattaacgagtcctacacggtatggccaaacccgagtgtatcccctacacctagtatat ccagtgatgacagctccagcagcaataatatgtattcctcctcggatgacgaacgtctctctatatattctcatttggcc aattctcaaattacgcctcatcagagacgttcctcagagtcccatcaaaagcaaacgattcatttgtgggaatttttaaa ggaacttcttcttcaacctgagaattacagtaattgcataaaatggatagaccgtgaaaggggcgtgttcaaaatagagg attcttcaagggtagcccggctgtgggggaggaggaaaaatcgacctgcaatgaactacgataagctcagtcggtcaatt agacaatactacaagaaaaacattatcagaaaaacagaaaactctaaaagactcgtttaccagttttgtgttccatattt atga |
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| Transcript ID | pfu_aug1.0_5375.1_30945.t2 |
| Definition | - |
>pfu_aug1.0_5375.1_30945.t2 atggataatctaacagaccagaaagtacctcaaactcacttcatgacaggatgcgaagaaataatgttctcagcccccgc aactagtatgtcacaattaccattgactgtaacagagtttatcgatataggtgatttggctccccttggaccaaacatca tgagtaacgtcactgatgtaagagaaatcacacaaaactgtacaagtgctaaaagtgtaactgaccagcgcctgcttggt tcagagagtcctaagagttttctggatttagacactgtcaatgaacaagacatatctttgtatgaccatactgtgaacat caaagaagaaaaaatgtatgtaaactgtgtttccgagcagctatcccccacattccagtatccgtatgattacagtttat tacaaacggacaattatcaaccaccctcttctccagaggagtatcatgatattaaaacagagcatcctgagcccgacttg tccgagactatagtcagagcattaaagagggagataaatgaagtctgtaaaacactggaaatacagcaagatcctatgag ttggagtgtagaagatgccagaaaatggctaatgtggcatctaggacatgattatcagacttctcaaggcgtcttagagc agttcaattttaagggcagcgagctgtgcgctctgacagccgatgaatttcagatgaaatctcttgaatggggaaagaat cttcatgcacaacttgatgtatggaaaaatgcttgtaaattgtgtgggccagtcatacagcagacaacacaaacgtatga cccatgtcaaatgttcaatgtgattaacgagtcctacacggtatggccaaacccgagtgtatcccctacacctagtatat ccagtgatgacagctccagcagcaataatatgtattcctcctcggatgacgaacgtctctctatatattctcatttggcc aattctcaaattacgcctcatcagagacgttcctcagagtcccatcaaaagcaaacgattcatttgtgggaatttttaaa ggaacttcttcttcaacctgagaattacagtaattgcataaaatggatagaccgtgaaaggggcgtgttcaaaatagagg attcttcaagggtagcccggctgtgggggaggaggaaaaatcgacctgcaatgaactacgataagctcagtcggtcaatt agacaatactacaagaaaaacattatcagaaaaacagaaaactctaaaagactcgtttaccagttttgtgttccatattt atga |
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Protein
| Protein ID | pfu_aug1.0_5375.1_30945.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5375.1_30945.t1 MDNLTDQKVPQTHFMTGCEEIMFSAPATSMSQLPLTVTEFIDIGDLAPLGPNIMSNVTDVREITQNCTSAKSVTDQRLLG SESPKSFLDLDTVNEQDISLYDHTVNIKEEKMYVNCVSEQLSPTFQYPYDYSLLQTDNYQPPSSPEEYHDIKTEHPEPDL SETIVRALKREINEVCKTLEIQQDPMSWSVEDARKWLMWHLGHDYQTSQGVLEQFNFKGSELCALTADEFQMKSLEWGKN LHAQLDVWKNACKLCGPVIQQTTQTYDPCQMFNVINESYTVWPNPSVSPTPSISSDDSSSSNNMYSSSDDERLSIYSHLA NSQITPHQRRSSESHQKQTIHLWEFLKELLLQPENYSNCIKWIDRERGVFKIEDSSRVARLWGRRKNRPAMNYDKLSRSI RQYYKKNIIRKTENSKRLVYQFCVPYL |
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| Protein ID | pfu_aug1.0_5375.1_30945.t2 |
| Definition | - |
>pfu_aug1.0_5375.1_30945.t2 MDNLTDQKVPQTHFMTGCEEIMFSAPATSMSQLPLTVTEFIDIGDLAPLGPNIMSNVTDVREITQNCTSAKSVTDQRLLG SESPKSFLDLDTVNEQDISLYDHTVNIKEEKMYVNCVSEQLSPTFQYPYDYSLLQTDNYQPPSSPEEYHDIKTEHPEPDL SETIVRALKREINEVCKTLEIQQDPMSWSVEDARKWLMWHLGHDYQTSQGVLEQFNFKGSELCALTADEFQMKSLEWGKN LHAQLDVWKNACKLCGPVIQQTTQTYDPCQMFNVINESYTVWPNPSVSPTPSISSDDSSSSNNMYSSSDDERLSIYSHLA NSQITPHQRRSSESHQKQTIHLWEFLKELLLQPENYSNCIKWIDRERGVFKIEDSSRVARLWGRRKNRPAMNYDKLSRSI RQYYKKNIIRKTENSKRLVYQFCVPYL |
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