Gene
| Gene Model ID | pfu_aug1.0_5375.1_30946 |
|---|---|
| Locus | scaffold5375.1 : 21587 ... 23475 : - |
| To GenomeBrowser | scaffold5375.1:21587..23475 |
| Genes list of scaffold | scaffold5375.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5375.1_30946.t1 | 6 | 1 | HTH_6 | 12 | 26 | 6.4e-06 | 25.8 | 0.045 | 130.0 | 2.3 |
| pfu_aug1.0_5375.1_30946.t1 | 6 | 2 | HTH_6 | 43 | 55 | 6.4e-06 | 25.8 | 0.26 | 780.0 | -0.1 |
| pfu_aug1.0_5375.1_30946.t1 | 6 | 3 | HTH_6 | 60 | 80 | 6.4e-06 | 25.8 | 0.04 | 120.0 | 2.5 |
| pfu_aug1.0_5375.1_30946.t1 | 6 | 4 | HTH_6 | 71 | 88 | 6.4e-06 | 25.8 | 0.023 | 69.0 | 3.2 |
| pfu_aug1.0_5375.1_30946.t1 | 6 | 5 | HTH_6 | 114 | 137 | 6.4e-06 | 25.8 | 0.00023 | 0.69 | 9.6 |
| pfu_aug1.0_5375.1_30946.t1 | 6 | 6 | HTH_6 | 151 | 173 | 6.4e-06 | 25.8 | 0.0099 | 29.0 | 4.4 |
Transcript
| Transcript ID | pfu_aug1.0_5375.1_30946.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5375.1_30946.t1 atggatcaacaaacaacgagaacacagttgccagatgaattaagaaacaacgataacacaattgccagatggatcaacac cattgccagatggataaacaacaacgaggacatcagggccagatggataacaaacaatgagaacacaattaccagatgga taaacaanccagatggatcaacaaacaacgaggacaccagggccagatggataacaaacaatgagaatacaattaccaga tggataaacaacaacgaggacataagtgcaagatggatcaacaaacaacgagaacacaattgccagaaggttcaacaaac aacgcggacacaattgccagatggatcaacaaacaacgagaacacaattgccagatggatcaagaaacaacgagaacaca attgccagatggatcaacaaacaacgagaacgccactgccagatggatcaccaaacaacgcgaacaccattgccaaatgg atcaacaaacaacgagaacaacattgtcagatggattcaacaaacgacatgaacgcgtag |
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Protein
| Protein ID | pfu_aug1.0_5375.1_30946.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5375.1_30946.t1 MDQQTTRTQLPDELRNNDNTIARWINTIARWINNNEDIRARWITNNENTITRWINXPDGSTNNEDTRARWITNNENTITR WINNNEDISARWINKQREHNCQKVQQTTRTQLPDGSTNNENTIARWIKKQREHNCQMDQQTTRTPLPDGSPNNANTIAKW INKQREQHCQMDSTNDMNA |
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