Gene
| Gene Model ID | pfu_aug1.0_5375.1_30948 |
|---|---|
| Locus | scaffold5375.1 : 56192 ... 59685 : - |
| To GenomeBrowser | scaffold5375.1:56192..59685 |
| Genes list of scaffold | scaffold5375.1 |
| Synonym | pfu_aug2.0_1537.1_24985 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5375.1_30948.t1 | 1 | 1 | RVT_1 | 12 | 67 | 1.0e-08 | 34.8 | 3.5e-12 | 1.7e-08 | 34.0 |
| pfu_aug1.0_5375.1_30948.t1 | 1 | 1 | rve | 334 | 442 | 4.9e-20 | 71.8 | 3.7e-23 | 1.8e-19 | 69.9 |
Transcript
| Transcript ID | pfu_aug1.0_5375.1_30948.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5375.1_30948.t1 atggagtccgttctgagaggactgcaatttgagacttgtctagtctacctggacgacataattgtcgtaggcaagtcatt tgaacaaatgattgaaaatcttacaatggtattcagtcgcctcgcccaagctggtctcaagcttaaggcaaagaaatgtt ctctatttgccaaagaagttgagtacctaggccatgtcatttctgaatctgggacagccactagtaaagacaagatacaa gtcataatcgactggcctgtgccaaagaatgtaactgaggaatccggattttgccgaacctttcatattggacacagacg caagaccgaccacagctcattaaggtggctcatgcatttcaaaaatccagagaaccaactcgccagatggcttgagatct tatcagagtttgactttgatatacagcatagacctggtaggcaacacaccaatgcagatgctttaagtaggctatcttgc aagcaatgtggctatcacacagactgggacagtgagcatcctagatctgaacatgtgttaagcctctcatcatctctgtt gccaatgcaagaagttcaatctaatgataaagacttacaaaaagtcagatcgtggctagacaataagacccgaccagact ccaaaaccattgacggtgagagctacttcctgaagtctctttacagtcaatttgaaaggctgtgcattattgacaatata atgtacagaagatgggacaactttgaatcaaatgaagctatatatcaggcacttgttccactaattgagcggagaacaat cttgcagtactgtaatgacgaaagaactgctggacatctgggcattaaaaagactcttgataagataagaaagggatatt actggcccaagttacagacagatgtccgtcagtatgtcacaggttgtgagttttgcacaaaaagaaagggcgaaaacaaa actaaacgagcgcccatgaaactagtccaaacaggttaccccatggaacgtctagcattagatatccttggtgaactccc tgtaacagacgctggtaataagtatatcctagtcatctcagactactttaccaagtggacagaaagctttcctatgccaa acatggaagctgcaacttgtgctaaaatcctggttgaacatgtgataagtagatttggcgtgccagcaactattcattca gatcagggcagtcaatttgaaagtgctctctttcaagaaatgtgtaaacttcttggaataaagaaaacacgcacactgtc atctgatgggatggtagagcgttttaaccgcacccttacatccatgcttagtgctttcgtgaatgaaaaccataacgact gggatgagcaacttcccttcgttatgatggcatacaggacggaaggacgattcagctcttcgacgtctagcaaagcaaac gaatccgattggaatgatcaggacccggggactctcattgctgagaacgagagttcatccagtgatagctcagactcttc ggacgatgaaaccgggaatcctgatgagttaatggcaggacgtatcatacgtaaaccgtccactcccgagcctgtctttt ctggcagagttgtggtcaagcgcacatctgaggacaaagtcagcgccgcgtcaaagaaacgtaaattgactgaggatgct gctcagattgcatgtgatgatcaagatgttatcatgcaatattcgtctctttcatgcgttgctccagttaatatgcactc cagttctagtcagtccacatcatcagtagatgttgcaacccagcatgaggttaccactagagacattggcgtacagtatg agaaatacaggaagagatctaaagagttgaagatgacaaaatacaatgagagaagaaagactatcgaggttgtgtacgag gttgaagagttcttcaacatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_5375.1_30948.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5375.1_30948.t1 MESVLRGLQFETCLVYLDDIIVVGKSFEQMIENLTMVFSRLAQAGLKLKAKKCSLFAKEVEYLGHVISESGTATSKDKIQ VIIDWPVPKNVTEESGFCRTFHIGHRRKTDHSSLRWLMHFKNPENQLARWLEILSEFDFDIQHRPGRQHTNADALSRLSC KQCGYHTDWDSEHPRSEHVLSLSSSLLPMQEVQSNDKDLQKVRSWLDNKTRPDSKTIDGESYFLKSLYSQFERLCIIDNI MYRRWDNFESNEAIYQALVPLIERRTILQYCNDERTAGHLGIKKTLDKIRKGYYWPKLQTDVRQYVTGCEFCTKRKGENK TKRAPMKLVQTGYPMERLALDILGELPVTDAGNKYILVISDYFTKWTESFPMPNMEAATCAKILVEHVISRFGVPATIHS DQGSQFESALFQEMCKLLGIKKTRTLSSDGMVERFNRTLTSMLSAFVNENHNDWDEQLPFVMMAYRTEGRFSSSTSSKAN ESDWNDQDPGTLIAENESSSSDSSDSSDDETGNPDELMAGRIIRKPSTPEPVFSGRVVVKRTSEDKVSAASKKRKLTEDA AQIACDDQDVIMQYSSLSCVAPVNMHSSSSQSTSSVDVATQHEVTTRDIGVQYEKYRKRSKELKMTKYNERRKTIEVVYE VEEFFNM |
|