Gene
| Gene Model ID | pfu_aug1.0_538.1_36569 |
|---|---|
| Locus | scaffold538.1 : 1 ... 15015 : - |
| To GenomeBrowser | scaffold538.1:1..15015 |
| Genes list of scaffold | scaffold538.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_538.1_36569.t1 | 1 | 1 | HHH_5 | 26 | 77 | 4.5e-06 | 26.7 | 4.3e-09 | 1.1e-05 | 25.5 |
| pfu_aug1.0_538.1_36569.t1 | 1 | 1 | Rad51 | 85 | 142 | 2.8e-24 | 85.3 | 2.1e-27 | 5.2e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_538.1_36569.t1 | gi|327272568|ref|XP_003221056.1| | PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_538.1_36569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_538.1_36569.t1 atggcagcagcagatcaagtggtcgaagaaaatgtctcagatgaagaagatgaggcatcattatttcaagacattgatct cctgcagaaccatggaattaatgttgctgatattaagaaattgaaacaatcgggaatctgtactataaagggtattcaga tgacaacaaagaaaaaattatgcagcatcaagggcatttcggaagcaaagatggagaagatcaaggaagcttctaataaa ctttgtgatccaggctttctgacagcattagagtatgcagataaaaggaaacaagtctttagactcacaactggcagtca agaacttgataagttgcttggtggaggtattgagagcatggcaattacagaagcatttggagaattcaggactggaaaaa cacagctatctcatacattatgtgcagaacactgtggctataatgatcttcatgatgaaatgataagagatcgtatagtt gtcggactaagagacagaaagctatcagagaaactacaaatggatgaaaaactgacactcgataaagcagtcaaattagt gcgacaaagtgccgctgtgaaagagcaacaagtagtcgtacatcaggagtctaaccaggcgtccgggatagccttagatg cagtaagagcaccaaggcgatatcagaaattccaaagagggaaccgttatgaacggattctcgccgagcgaacttttgat ggggagaaaaataagaacgactcttcccacagcgccaaaattattaaagccgataaatatcccagtgaacaaagtaagag aaaacgaagcaaagcaaaaggcgaaacaaaagaagaattatga |
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Protein
| Protein ID | pfu_aug1.0_538.1_36569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_538.1_36569.t1 MAAADQVVEENVSDEEDEASLFQDIDLLQNHGINVADIKKLKQSGICTIKGIQMTTKKKLCSIKGISEAKMEKIKEASNK LCDPGFLTALEYADKRKQVFRLTTGSQELDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCAEHCGYNDLHDEMIRDRIV VGLRDRKLSEKLQMDEKLTLDKAVKLVRQSAAVKEQQVVVHQESNQASGIALDAVRAPRRYQKFQRGNRYERILAERTFD GEKNKNDSSHSAKIIKADKYPSEQSKRKRSKAKGETKEEL |
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