Gene
| Gene Model ID | pfu_aug1.0_538.1_36572 |
|---|---|
| Locus | scaffold538.1 : 32446 ... 45457 : + |
| To GenomeBrowser | scaffold538.1:32446..45457 |
| Genes list of scaffold | scaffold538.1 |
| Synonym | pfu_aug2.0_33.1_10144 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_538.1_36572.t1 | 2 | 1 | Na_Ca_ex | 46 | 203 | 1.4013e-45 | 155.2 | 1.6e-27 | 7.9e-24 | 83.8 |
| pfu_aug1.0_538.1_36572.t1 | 2 | 1 | Calx-beta | 331 | 417 | 0.0 | 155.0 | 1.5e-27 | 7.6e-24 | 83.5 |
| pfu_aug1.0_538.1_36572.t1 | 2 | 2 | Calx-beta | 433 | 531 | 0.0 | 155.0 | 4.2e-24 | 2.1e-20 | 72.5 |
| pfu_aug1.0_538.1_36572.t1 | 2 | 2 | Na_Ca_ex | 637 | 791 | 1.4013e-45 | 155.2 | 1.6e-25 | 7.9e-22 | 77.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_538.1_36572.t1 | gi|291242662|ref|XP_002741228.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_538.1_36572.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_538.1_36572.t1 atgtcgtcctcctgtgacctatcctcgtacacatgctccgacgtggggatgttattccccattgtcagtgagtacacatg gcctatcggaggaagagcttttatatatcttcttggactactatggagttttatggcagtgtcgatcattgcagacattt tcatgcaggctattgaaacaatcaccagtaaaacacaagacatcaaaataccagacaatgaaggcggctatcagacagtc caagtcaaattatggaacggcactgtcgctaacttgacactgatggcgctaggttcgagtgccccagaaatattattgac tgctatcaacacaatattcaatgacttcaaatcggaggcattgggccccagttgcattgttgggtctgcagcctttaact tgatggtgataacaggcgtttgtgtgatgtcagttccagagggcgaggttaggaagatagggcagcccaaggtgtttgct atcaccgccgtgttcagtgtgtttgcctatatttggctgatcatcatcttggtggttatcacccctgactacgtggacct ttgggaggcaatagtcacgttcttattcttccctattatggtgatcattgcatacatagcggataaagattactgtggga agaaaccaacggacgacaaggaggctctggaaatagatgttgacggcaatctactgacgaaggaccatgcagacaaacaa gttattgtggaaatgctcaggagattacgagaaaatcccaatgccaaggagcaggacattgccacgcttactgcgcatct aatggagcagaataagtcacatgaccggggctggtatcgtatcaacgccatcaggtcactgactggtggaaccaaactca acaccacactcaacaccagggctcaggagctcttggaagaattactgatagaggaacagtctggcgccagtcagagcttc atggaactaagtgaagggggtaaaaaatccatcatagagtttgacgctccaagtacagccgtactggagaaagacgggcg tgttagagttaacatcatgcgtcatgggaatcttcaaaataaagtcatctttaaagttgagactattgacggaaccgctg aggccatacaggactacaaaccactaaaagagaccttggtgttccaacccgatgaaaccatcaaacacattgatatagag atcatcgacgataacatatgggagccagacgaggtgttctttgttagggtgaccgcagaacctgatcagatggccgtggt gggcaagagggccattacacaggtcgtcatccttaacgatgatgagcctggaacattggattttcccaaacccagctttt tgttcaaagagagcgttggaactgctatgatccccttacaaagaacaaacggagcggacggtgaaatcagtgtcaagtgg aaaacaaaggacatcacggccgtagggggtcgggactacaaggaaacatccgggacactgaccttcgaacacggagagat caccaagatgatagaaattacgatacataatgacatggaatttgagaaggatgaaaactttgagatcgacctgatagaaa caacagggggagctacaataggaaagcttaaaagatgcgtggtgacaattgtcaacgacgacgaattcaacggaatagtg agccgtattgcagatttgacgaacgcaaacttggacgctctgcgcatgagcaaacaaacatgggcgaagcaatttgagga agctatgaatgtaaacggaggagaccttgaaaatgctactgtatttgcctatgtcatgcattttttcacctttggcttca agtttatatttgcttgcgttcctcctccaagtttccttggtggatacctgtgtttcattgtgtcgttgattttgattggc ctgctgacagctgttgttagtgacctagctagcattttcggatgtctcattggcttagaggatgtcgtaactgctattac ctttgttgccttgggaaccagcttgccagatctgtttgccagtcgtcaagcagcactgatggagaaacatgcggattctt ccattggtaacgtgacgggaagtaactcggtcaacgtattccttggccttggcttagcctggattttggcagcctcgtac tggaccgcccagggtaagacgtttgaggttccagcaggtgcgctcagcttcagtgttgtcatctttaccatttgtgcttt agtaactcttttcatcttagttcttagaaggaacttatcattgtttgggaaagcagaattaggtggtccaaaagtcccta aaatggtctctggtattttcatgattttcacctggattttatacgttctcctgtcctccctccaggtgtatgaatacata cctggattctaa |
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Protein
| Protein ID | pfu_aug1.0_538.1_36572.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_538.1_36572.t1 MSSSCDLSSYTCSDVGMLFPIVSEYTWPIGGRAFIYLLGLLWSFMAVSIIADIFMQAIETITSKTQDIKIPDNEGGYQTV QVKLWNGTVANLTLMALGSSAPEILLTAINTIFNDFKSEALGPSCIVGSAAFNLMVITGVCVMSVPEGEVRKIGQPKVFA ITAVFSVFAYIWLIIILVVITPDYVDLWEAIVTFLFFPIMVIIAYIADKDYCGKKPTDDKEALEIDVDGNLLTKDHADKQ VIVEMLRRLRENPNAKEQDIATLTAHLMEQNKSHDRGWYRINAIRSLTGGTKLNTTLNTRAQELLEELLIEEQSGASQSF MELSEGGKKSIIEFDAPSTAVLEKDGRVRVNIMRHGNLQNKVIFKVETIDGTAEAIQDYKPLKETLVFQPDETIKHIDIE IIDDNIWEPDEVFFVRVTAEPDQMAVVGKRAITQVVILNDDEPGTLDFPKPSFLFKESVGTAMIPLQRTNGADGEISVKW KTKDITAVGGRDYKETSGTLTFEHGEITKMIEITIHNDMEFEKDENFEIDLIETTGGATIGKLKRCVVTIVNDDEFNGIV SRIADLTNANLDALRMSKQTWAKQFEEAMNVNGGDLENATVFAYVMHFFTFGFKFIFACVPPPSFLGGYLCFIVSLILIG LLTAVVSDLASIFGCLIGLEDVVTAITFVALGTSLPDLFASRQAALMEKHADSSIGNVTGSNSVNVFLGLGLAWILAASY WTAQGKTFEVPAGALSFSVVIFTICALVTLFILVLRRNLSLFGKAELGGPKVPKMVSGIFMIFTWILYVLLSSLQVYEYI PGF |
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