Gene
| Gene Model ID | pfu_aug1.0_5384.1_01978 |
|---|---|
| Locus | scaffold5384.1 : 1 ... 9875 : + |
| To GenomeBrowser | scaffold5384.1:1..9875 |
| Genes list of scaffold | scaffold5384.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5384.1_01978.t1 | 2 | 1 | SNF2_N | 49 | 90 | 3.5e-25 | 88.4 | 1.0e-12 | 5.1e-09 | 35.3 |
| pfu_aug1.0_5384.1_01978.t1 | 2 | 2 | SNF2_N | 90 | 217 | 3.5e-25 | 88.4 | 1.4e-18 | 6.7e-15 | 54.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5384.1_01978.t1 | gi|224052611|ref|XP_002191629.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_5384.1_01978.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5384.1_01978.t1 gctggtatcccagatcctgtagaaatgaaggccagtctggtagaagccaaggagaaagaaaggaagtttctggatcagct tattgatggctcaaacttagaaaattataaagtctgtgttccgatcatggcagaactacgtaaatatcagcaggatggag tggactggctggctttcatgaacaagtacagccttcatggtatactgtgtgatgatatggggttagggaaaactttacaa tccatctgtatactagccagtgatcattttatccgggaagagaaattcaaaatggtttctcagttgtatttgaataattg gcatagaattttcaatttggctgaaatcaaaggagccctagccatggagtcattacacagacaagttttaccgtttatat tgaggagactgaaggaggacgttctacatgatctgccacctaaaattatacagaattattactgtgatctcagctctcta cagattcaactgtatgaggactttgctaaatctcgagccaagcagggaatagaggagactgtcacgtcgtacagcgatga acagcctaaagagaagaaaaatcataccactacccacgtctttcaggccttacagtatctcaggaagctatgtaatcatc cagcattggtacttacacccaatcatcccaaatacacagaaactattgctcaacttaaaaaacagaattccaatctcaga gacattcaacatgctcctaaacttaatgctctcaaagcccagatgccaagtgtcacatactcccgtttagatggtagtgt accggctgccttgagatacgatatagtcaacaagccatggaccgagcccatcgcattggtcagaagaaagtggttaatgt ttacagactcatcacaagaggaacgcttgaagaaaagataa |
|
Protein
| Protein ID | pfu_aug1.0_5384.1_01978.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5384.1_01978.t1 AGIPDPVEMKASLVEAKEKERKFLDQLIDGSNLENYKVCVPIMAELRKYQQDGVDWLAFMNKYSLHGILCDDMGLGKTLQ SICILASDHFIREEKFKMVSQLYLNNWHRIFNLAEIKGALAMESLHRQVLPFILRRLKEDVLHDLPPKIIQNYYCDLSSL QIQLYEDFAKSRAKQGIEETVTSYSDEQPKEKKNHTTTHVFQALQYLRKLCNHPALVLTPNHPKYTETIAQLKKQNSNLR DIQHAPKLNALKAQMPSVTYSRLDGSVPAALRYDIVNKPWTEPIALVRRKWLMFTDSSQEERLKKR |
|