Gene
Gene Model ID | pfu_aug1.0_53978.1_05544 |
---|---|
Locus | scaffold53978.1 : 1 ... 4170 : - |
To GenomeBrowser | scaffold53978.1:1..4170 |
Genes list of scaffold | scaffold53978.1 |
Synonym | pfu_aug2.0_201.1_03785 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_53978.1_05544.t1 | 2 | 1 | Carb_kinase | 40 | 63 | 7.4e-09 | 35.2 | 6.8e-08 | 0.001 | 18.4 |
pfu_aug1.0_53978.1_05544.t1 | 2 | 2 | Carb_kinase | 64 | 96 | 7.4e-09 | 35.2 | 3.9e-07 | 0.0058 | 15.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_53978.1_05544.t1 | gi|324517647|gb|ADY46882.1| | 3.0e-16 |
Transcript
Transcript ID | pfu_aug1.0_53978.1_05544.t1 |
---|---|
Definition | - |
>pfu_aug1.0_53978.1_05544.t1 gatcatcactgatgagtgccagccatgcaagctacatcaagcctggaatcgtcctggacatggtcaagtccattatacct gaactgaccactgacctgcacaaaggcatgatgggaagggtcgtggtggtaggaggatgcaaggagtatacaggtgcacc atattatgctgccatttcttccctgaaattggatggtttacacttggtcacagaatttcctgatgttgtgaggggatata aaaaagccattctgactcctaatgttgtagaattctccagactatataacaaactg |
Protein
Protein ID | pfu_aug1.0_53978.1_05544.t1 |
---|---|
Definition | - |
>pfu_aug1.0_53978.1_05544.t1 SSLMSASHASYIKPGIVLDMVKSIIPELTTDLHKGMMGRVVVVGGCKEYTGAPYYAAISSLKLDGLHLVTEFPDVVRGYK KAILTPNVVEFSRLYNKL |