Gene
| Gene Model ID | pfu_aug1.0_542.1_50935 |
|---|---|
| Locus | scaffold542.1 : 13016 ... 22000 : + |
| To GenomeBrowser | scaffold542.1:13016..22000 |
| Genes list of scaffold | scaffold542.1 |
| Synonym | pfu_aug2.0_270.1_00530 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_542.1_50935.t1 | 2 | 1 | Ets | 143 | 157 | 3.2e-28 | 97.6 | 0.37 | 5500.0 | -2.5 |
| pfu_aug1.0_542.1_50935.t1 | 2 | 2 | Ets | 265 | 346 | 3.2e-28 | 97.6 | 2.2e-32 | 3.2e-28 | 97.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_542.1_50935.t1 | gi|260826550|ref|XP_002608228.1| | hypothetical protein BRAFLDRAFT_87894 [Branchiostoma floridae] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_542.1_50935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_542.1_50935.t1 atgatagaggatatggaaccgccgtcatacattttggataattcctacgtgcacaatactcaaaataataactttgacat tgccgatttcttatgcgactccggggtccatccaaacgaatcacgtgatcagtgcaatttgtccgaagattcttgcaaca gaagcgactgtacagacggttactatggttaccagtccagtggggactacatagatccccccagtgaatattgtaatgac aatgtgccttatgacacggactctctcaaatattcatgtaacccttctgacagatccgggtgcaccgtggatgacgatgg caaagttaaagcaatatctgtaagacaagatcacagtgcccaaatttcccaaagacccatgaacgattcatgcggaaagg gcgtaaaaatggaagatctctccagcaaacctgaaatgaaaatggaacatatgtcagaacacgtgatgaacgatcacatg atgtacgatatccaacaactgaccaaatataactaccaaatgccaatgtcacatctcttacaagctcagtcaatgaagca ccacccattccacacccatccccaccctcaccacatgtctccatatgaacaatacccaccacattgcatgtactcggact tcggagcaatgcaccgcatgccaccaccgccatgtcatatcccagaagaccacatggtgcctcagccaattagaaggcga cctggaagaccccggattaaaagtctaccattagaagaggaagctgccagagataagaaagcaaaaaaccaacatttatg ggagttcatatacgaaattctgatgaatccattgtacaatccacaatatctacgttgggagaatcaacgcgagggagtgt tccgttttgtccaatcagaagccgtggcacagttatggggtggccttaaaaacaacgaaaacatgacgtacgaaaaattg agtcgcgcaatgaggcactattacaagagaggtattttagaacgagtagagggacgacgacttgtctacaaattttctcg aattgcaatggaaagagtccgagagaaacggtactcagtctaa |
|
Protein
| Protein ID | pfu_aug1.0_542.1_50935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_542.1_50935.t1 MIEDMEPPSYILDNSYVHNTQNNNFDIADFLCDSGVHPNESRDQCNLSEDSCNRSDCTDGYYGYQSSGDYIDPPSEYCND NVPYDTDSLKYSCNPSDRSGCTVDDDGKVKAISVRQDHSAQISQRPMNDSCGKGVKMEDLSSKPEMKMEHMSEHVMNDHM MYDIQQLTKYNYQMPMSHLLQAQSMKHHPFHTHPHPHHMSPYEQYPPHCMYSDFGAMHRMPPPPCHIPEDHMVPQPIRRR PGRPRIKSLPLEEEAARDKKAKNQHLWEFIYEILMNPLYNPQYLRWENQREGVFRFVQSEAVAQLWGGLKNNENMTYEKL SRAMRHYYKRGILERVEGRRLVYKFSRIAMERVREKRYSV |
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