Gene
| Gene Model ID | pfu_aug1.0_5420.1_59768 |
|---|---|
| Locus | scaffold5420.1 : 48227 ... 54975 : - |
| To GenomeBrowser | scaffold5420.1:48227..54975 |
| Genes list of scaffold | scaffold5420.1 |
| Synonym | pfu_aug2.0_1410.1_01610 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5420.1_59768.t1 | 1 | 1 | NACHT | 194 | 284 | 1.9e-07 | 30.8 | 1.3e-10 | 3.8e-07 | 29.9 |
Transcript
| Transcript ID | pfu_aug1.0_5420.1_59768.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5420.1_59768.t1 atgagggagaagactgctcctgacgcagatcgtttgaaaacacatgacataactgaaaaaataactgaaaaagaatcctt ggaatctactacaaaagatattgtgaaagctactgtaaaaattcctaaggaagatcctgtggtagacactgtagaagttt tgaagctggaccatgcaaaaagaactgacgaaactactgagatgggtttttttaaacactttgagaaaattgaaccgtct ttgaaggatctattgagcgatccgcatatagccaaattacagagaggtgaacttacgattaattctaatctcatgaagac gaggctgtatgaaatcaatcaacgtctctcagaggcacctactgtcctatcgcacttattacaatcgggtgataaaatgt caagagaggcattatatgcttcagttcctttattaaagtacaatgatattatggatgtgttatattcacagaacaagaca gatattgaaaacatacccgatcgcatattctgtaccactaacaaagagatatacagaaaacggtacaaagactttaaaga agatacaaactccgcatgtgtgttcatactcggggaagctggatgtggtaaaacaagctactgtctacatcttctaagac aatggtgcagaggagacgaactccaaacatttgataaagtcttttatattgatgcttccgttttgcaaacctcaaagcca tcgacgtctggtctcatttccactgctgtttttggaaacattactttctctgaaaaccaagtagattgtgttctacaaaa tgaaaaatgtcttattttgatcgacggggatggatactttagagatagcttgcttcgagaaaatgagataaaggagttag ttatggagtactgtaattgtgtttttgtttttcttgtgaggcctttaaacttcatgagtgtgattccattcgatctatat ctacatgtattttcccaggtcaacgttcaattcatacagttattaggattagatgaaaagggaattacatcattgtacag taatgtcatggtcaacagttacgaaatcagacaatcagagtctctacgtgaaataaagacagacgatcctcaacaaatga cgaagaagtcgactttacggaaggaaacaaaagacccagataccgctctttcagcaacagaatcctacctttttcaaagt aaaggcgaatcagatactcaagcttatattgcacaaaatccaaccgatttagagcagctagttaaaacacccggcagtgg cgattttgcaaaggaggcagagactaagccaaaaactgagaaagatgtttcgaaacatgacaggaaggaattagaatttt acaaaataaaagggatattggaaaaaggacttcgtgaaaattacgatttgataatgaaaataccaatgttgggatctgtc tgtgttggattgcttgcagaaggaaaagatttgcgaagaaacttcacaaacttctatctttgtcttattgataaacttgt aggaggacatgaatctttgtccagtggaaaaggagaaaaaagcataaaaccgtttgacctgtttctaccttatgagaatg ttcatcgtcatgtgaaatccctccgtaaattaggtgacattgcatttaattctatattttctccagcttcaaaatcagta aattacaagacgttagatgaatatttagaagaaacagaaatatattttgcgattagaaccggtcttcttgtccccgtcca aacattgacaggtaagacatccgacgagcagagtgtctgtttcttacacaaaactattcaagattctttggtctccatat atatagttatagaaaaacaggaagcattagactccgtctgtcagcagttgaccagtatggacgttataatagatgtctca catgttatcatgatggtctgtggtctgaatccgaacctaggctgtcgtataacgaggagcattaaggacgttcttgataa aaatgatacagtatttattcacagaaaaattctagcgtgtaactactttattagacagttttataagcttcagctcaggt ggtacacagagtacaaagatacagaaactaatattggaagtgatacaaaagacagtttttatgtgtcagacatctacgtt gacgatgacactgacaaggatacagttactaagaccattggtctactgtccgataagagcgtcattgttacgtcgttgta tatcaatgacgttcctgctgaaaatggcttgtcagacaaagtgttgaacgatttcttggatctcaatacatcattagaat cattatacgttagcggaaggcgatctttcagatcaatagaaccattatctttccccatcttgacagtgttaaagttacgt tatgtacatatccggcctgctagtagtgacgacgagacagcaaagccactactttatcatttaccaatgttacaacgtct tcacctgtacaacatagagctaacaaatagattactagggtttacatctaataaggggaaaatgagaatgttgaaagtat tctacattgataaagtagacatgggtgaccaatccattgagcttgcatcggatatgacagacattaaatatataaatctc gaaaatgtaaagatgtcaccaccaggttggatgaagtttataagatcactcgtcaacattcaccattcctatcgtgttag gctaaaacgttcaaatattgatgctcaatcgctagatatggtcagaacagataaaaattttgaagtggaaaaagaaacct actatatctccatcaccaggatgtggccttcgacataa |
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Protein
| Protein ID | pfu_aug1.0_5420.1_59768.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5420.1_59768.t1 MREKTAPDADRLKTHDITEKITEKESLESTTKDIVKATVKIPKEDPVVDTVEVLKLDHAKRTDETTEMGFFKHFEKIEPS LKDLLSDPHIAKLQRGELTINSNLMKTRLYEINQRLSEAPTVLSHLLQSGDKMSREALYASVPLLKYNDIMDVLYSQNKT DIENIPDRIFCTTNKEIYRKRYKDFKEDTNSACVFILGEAGCGKTSYCLHLLRQWCRGDELQTFDKVFYIDASVLQTSKP STSGLISTAVFGNITFSENQVDCVLQNEKCLILIDGDGYFRDSLLRENEIKELVMEYCNCVFVFLVRPLNFMSVIPFDLY LHVFSQVNVQFIQLLGLDEKGITSLYSNVMVNSYEIRQSESLREIKTDDPQQMTKKSTLRKETKDPDTALSATESYLFQS KGESDTQAYIAQNPTDLEQLVKTPGSGDFAKEAETKPKTEKDVSKHDRKELEFYKIKGILEKGLRENYDLIMKIPMLGSV CVGLLAEGKDLRRNFTNFYLCLIDKLVGGHESLSSGKGEKSIKPFDLFLPYENVHRHVKSLRKLGDIAFNSIFSPASKSV NYKTLDEYLEETEIYFAIRTGLLVPVQTLTGKTSDEQSVCFLHKTIQDSLVSIYIVIEKQEALDSVCQQLTSMDVIIDVS HVIMMVCGLNPNLGCRITRSIKDVLDKNDTVFIHRKILACNYFIRQFYKLQLRWYTEYKDTETNIGSDTKDSFYVSDIYV DDDTDKDTVTKTIGLLSDKSVIVTSLYINDVPAENGLSDKVLNDFLDLNTSLESLYVSGRRSFRSIEPLSFPILTVLKLR YVHIRPASSDDETAKPLLYHLPMLQRLHLYNIELTNRLLGFTSNKGKMRMLKVFYIDKVDMGDQSIELASDMTDIKYINL ENVKMSPPGWMKFIRSLVNIHHSYRVRLKRSNIDAQSLDMVRTDKNFEVEKETYYISITRMWPST |
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