Gene
| Gene Model ID | pfu_aug1.0_5422.1_52530 |
|---|---|
| Locus | scaffold5422.1 : 2546 ... 3637 : + |
| To GenomeBrowser | scaffold5422.1:2546..3637 |
| Genes list of scaffold | scaffold5422.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5422.1_52530.t1 | 2 | 1 | TIR | 10 | 114 | 6.2e-10 | 38.6 | 5.0e-13 | 2.5e-09 | 36.7 |
| pfu_aug1.0_5422.1_52530.t1 | 1 | 1 | TIR_2 | 10 | 95 | 8.5e-09 | 35.4 | 3.6e-12 | 1.8e-08 | 34.4 |
| pfu_aug1.0_5422.1_52530.t1 | 2 | 2 | TIR | 137 | 164 | 6.2e-10 | 38.6 | 0.023 | 120.0 | 2.1 |
Transcript
| Transcript ID | pfu_aug1.0_5422.1_52530.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5422.1_52530.t1 atgtcccgacgtcgtcatgaatatgatgtttttatctcattcgacgaacaaagagtagacatacgaaaatgggtaatgaa agaactgataccgatgcttcaaaaggaagattatagtttttatgttcccacaatttctttaccaattggtgaaataagaa cagaggaaatagagagagttgttcttaaatgccaaaactatattgttgttctgtccgacgagtattttggagaaggaact tcttggacttcttttgaatggaaatcaatatggaagaggtatttagcaacacctaccgttaacctggttgttgtaaattt tgacttattagaaaggggagatatactaaatcggccaatgaaagctatatttagtcttggatttgctatagagtttcata atcaaaaaggagacatgaaagagaaaataaaaaagaaacttaacaaaacaggcatgataagaatatccagtgacaaaaca agggacaaacagacctctactgacaataggaagttaataaaagtggacgaggacacccctttattgattaaatatgaatg a |
|
Protein
| Protein ID | pfu_aug1.0_5422.1_52530.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5422.1_52530.t1 MSRRRHEYDVFISFDEQRVDIRKWVMKELIPMLQKEDYSFYVPTISLPIGEIRTEEIERVVLKCQNYIVVLSDEYFGEGT SWTSFEWKSIWKRYLATPTVNLVVVNFDLLERGDILNRPMKAIFSLGFAIEFHNQKGDMKEKIKKKLNKTGMIRISSDKT RDKQTSTDNRKLIKVDEDTPLLIKYE |
|