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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5423.1_59772
Locus scaffold5423.1 : 36722 ... 43155 : -
To GenomeBrowser scaffold5423.1:36722..43155
Genes list of scaffold scaffold5423.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5423.1_59772.t1 gi|240953855|ref|XP_002399703.1| satb1, putative [Ixodes scapularis] 8.0e-29

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_5423.1_59772.t1
Definition-
>pfu_aug1.0_5423.1_59772.t1
atgagtcagtcgtcgttggccaaacagtgtcctcttacacagtcagcaatatctaacatagctaactggaaatatgacag
taaactgagcaaggagaagtgtaaagagttcggagaatggtatgcccaattcattactcagaaagaattcaaagatggaa
ttgaagctgttccgaaagactctcggttaacattccacccacagcacgagatacccacgatgcgtcagtggtacaccgga
tgtaaggcgccgacagacgacaaactcagattctacgctgctgaactaaacaaagggcacgtgcgacaagaacgtccaaa
agtaacagtagcaaaacttaaaatttggtggaagaatgaacgacaaagagaaaaaaggaacaaggacaaaaaagactcgg
ataaaaatagtgtgagaacatgtttcgatcaacccacagtaaatcttaatgacgagccatccacgagtgcttcgcttaac
tcagagacacaatcattttctcatgaaagtataacttcatacctgaatttgtaa

Protein
Protein IDpfu_aug1.0_5423.1_59772.t1
Definition-
>pfu_aug1.0_5423.1_59772.t1
MSQSSLAKQCPLTQSAISNIANWKYDSKLSKEKCKEFGEWYAQFITQKEFKDGIEAVPKDSRLTFHPQHEIPTMRQWYTG
CKAPTDDKLRFYAAELNKGHVRQERPKVTVAKLKIWWKNERQREKRNKDKKDSDKNSVRTCFDQPTVNLNDEPSTSASLN
SETQSFSHESITSYLNL

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