Gene
| Gene Model ID | pfu_aug1.0_5425.1_45212 |
|---|---|
| Locus | scaffold5425.1 : 11309 ... 20765 : - |
| To GenomeBrowser | scaffold5425.1:11309..20765 |
| Genes list of scaffold | scaffold5425.1 |
| Synonym | pfu_aug2.0_15361.1_06550 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5425.1_45212.t1 | 1 | 1 | Cpn60_TCP1 | 22 | 164 | 6.8e-39 | 133.7 | 5.99756e-43 | 8.9e-39 | 133.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5425.1_45212.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5425.1_45212.t1 atgggtgtggtcattttctcctatataagtctatgtaatatagtgaacaccaattctcagaaaagtttagcatgtaagcc agtagctagccttgatcactttacaccagagaacttgggaagtgcagatctgatagaggaagtccaaacaggaacaagta aaattgtcaagattactggtatagccaatccagggaagacgatgacagtactgatacgaggctccaataagctcgtactg gaggaggctgatagatctatacatgatgccctctgtgttattagatgtcttgttaagaaaagagcattgattgccggagg aggtgctcctgaaacagagttgtcgttacgtcttaatgagtacgctaacactctgacaggaatggagcagtactgcttca gggcatttgctgaggctctggaggtgattcctatcacactggctgagaacgctggacttaatcctatagctacggtaaca gaactcagaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn ntatttttgagtatgaaaagtagaggagaacttgaggtcttctaccaaaattatgcttttctgaccagaatcttcaaaca cgatattcaccatatacatgtatga |
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Protein
| Protein ID | pfu_aug1.0_5425.1_45212.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5425.1_45212.t1 MGVVIFSYISLCNIVNTNSQKSLACKPVASLDHFTPENLGSADLIEEVQTGTSKIVKITGIANPGKTMTVLIRGSNKLVL EEADRSIHDALCVIRCLVKKRALIAGGGAPETELSLRLNEYANTLTGMEQYCFRAFAEALEVIPITLAENAGLNPIATVT ELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XFLSMKSRGELEVFYQNYAFLTRIFKHDIHHIHV |
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