Gene
| Gene Model ID | pfu_aug1.0_5428.1_52538 |
|---|---|
| Locus | scaffold5428.1 : 12754 ... 20415 : - |
| To GenomeBrowser | scaffold5428.1:12754..20415 |
| Genes list of scaffold | scaffold5428.1 |
| Synonym | pfu_aug2.0_1575.1_18413 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5428.1_52538.t1 | 1 | 1 | DUF1768 | 211 | 361 | 0.0 | 155.8 | 0.0 | 1.4013e-45 | 155.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5428.1_52538.t1 | gi|340378461|ref|XP_003387746.1| | PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Amphimedon queenslandica] | 4.00001e-40 |
Transcript
| Transcript ID | pfu_aug1.0_5428.1_52538.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5428.1_52538.t1 atggatgtcaatgaagaaaagatggaggagaatttacaagcttccgcatcaagtcagtctcatcaagattttgacaagaa tataaaagattcatcaattcctatggcagatacagaggaatcaccttgtttgaaagatactaactcatccctcccccaaa aagatcatgcagactctgaggtatcatcctctaagacagaggaaggtgataaatgggagcttaagggagaatcgggaatt aatatgactgatgttgtaaaggaatcggtacatgaagaggaaaaaatagatgacacacaccagaacaagaatgaaataga tggcaatgatgatgaaaatgacaatgacaagtcagactcagaattcaaaaattctttcagtagatcttctgatgacaaac aaacaaattctggtgtaaaacaagacaatccagatggcaatcgtaactctaaaggtgttgaagcacaagatgtctcaggg aaggctaaaaaaaataaaaaaagcagaaaacatagatttaatttaggttgctttggaggaaatgtttccaactctgattg tgaaagtgaagaggaagttcctaaagagcttatagagaaattcaaggatgacaaggaaagtgattttaagtatttctggc agtcatactccccgtttagtcaatggtacaaggccacaatgacaatagatggtacagaatacaactgtgctgagcaatac atgatgcagcagaaggctttacttatggaagacatagagaatgctggcttgattatggccctagatgaaccaagggaaca gaagagtgtgggtcgagaggtcaagaactgggatcaagatttgtgggatgataactgctgggctattgtcagaaagggaa accttgagaagttcggacaaaatgaggaattaatgggtgagctgattctcacgtaccccaagatccttgtggaagccagt ccttacgacaaggtttggggtatcggcttgaaagcagatgactggaaagcgcacaacagggcatactggaagggtgaaaa tagactaggatatattttaaccgaggtgagagatcaactcatgcaggagagaggaatgcttgatggcaatatacaaactg tgatgctcagtgataaccatgaacacattttgaaagatgaaaacagtgcagcagccaaaatagtaccagtaggggaccaa gagcagtctgataatatcaatataacacatgaaatatcagacaagccagtgtcagcaggtaatacagacagtgaccaaga aaagtctgaagacatgcacaattccaatatagtagacagaaaacctgacatagacaatcatgtaattaacgatggggata tagaggctggaggagcatcaggtcaagatgaagagaaagtagaagatgaagctaaggttgagacaaagtcaactaacaat ttagaaataggacctcaaactataggtactgatgttggtgatattaatgaatgcttagaaactaagctttaa |
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Protein
| Protein ID | pfu_aug1.0_5428.1_52538.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5428.1_52538.t1 MDVNEEKMEENLQASASSQSHQDFDKNIKDSSIPMADTEESPCLKDTNSSLPQKDHADSEVSSSKTEEGDKWELKGESGI NMTDVVKESVHEEEKIDDTHQNKNEIDGNDDENDNDKSDSEFKNSFSRSSDDKQTNSGVKQDNPDGNRNSKGVEAQDVSG KAKKNKKSRKHRFNLGCFGGNVSNSDCESEEEVPKELIEKFKDDKESDFKYFWQSYSPFSQWYKATMTIDGTEYNCAEQY MMQQKALLMEDIENAGLIMALDEPREQKSVGREVKNWDQDLWDDNCWAIVRKGNLEKFGQNEELMGELILTYPKILVEAS PYDKVWGIGLKADDWKAHNRAYWKGENRLGYILTEVRDQLMQERGMLDGNIQTVMLSDNHEHILKDENSAAAKIVPVGDQ EQSDNINITHEISDKPVSAGNTDSDQEKSEDMHNSNIVDRKPDIDNHVINDGDIEAGGASGQDEEKVEDEAKVETKSTNN LEIGPQTIGTDVGDINECLETKL |
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