Gene
| Gene Model ID | pfu_aug1.0_5434.1_01988 |
|---|---|
| Locus | scaffold5434.1 : 13641 ... 23640 : - |
| To GenomeBrowser | scaffold5434.1:13641..23640 |
| Genes list of scaffold | scaffold5434.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5434.1_01988.t1 | 1 | 1 | Mur_ligase_M | 56 | 204 | 1.8e-06 | 28.1 | 5.9e-10 | 8.8e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5434.1_01988.t1 | gi|260789187|ref|XP_002589629.1| | hypothetical protein BRAFLDRAFT_284412 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5434.1_01988.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5434.1_01988.t1 gaggcagtgaaaaccctgaacactttacagagtaacgcacagacaatagagaaaatgaggaaggaaagggataaaaagtc acatctcaatattcctaaaatgatcaagtacgcacagagaactggcgtaacattagacgatatagacaatctaaatgtga tacatgtaagtggaaccaaaggtaaaggatcaacatgtgctttctgtgaaagcattctacgtcaccatggatacaaaaca gggtttttcagttctccacatttggtagaagtgagggagagatttaggataaatggacaaccaatttcccgatccatgtt tgctgattatttttgggaggtttatagtaaactgattggtagcaaggatgctgaggagagtgggggtatgccggcatatt ttgcatttttgacggtgatggccttcaacatgttcaagcaggagaaggtagacgtggccattatagaggtcggaatcggg ggccagtacgatagtaccaacctcatacgtaaacctgtcgtgtgtggcgtcacatctctgggcctcgatcatgtgtccat tttaggagaaactgtagagaaaatagcctggcacaaagctggtatattcaagcctggagtgcctgctttttcctcccctc agcacgagggtgccatgaaggtactgcaggacagagccaatgaaattgggaaccgccttgatgtggtatcaccccttgct gagcgtgaccaggatggtaataagctacggctcggtatatgtggccatgtacagcagcataacgctgctctcgctgtaca gctttgtaaaacgttcatgaggactagacgaaaaagcacgacacaagaagaatcagaaactgaccaaactaaaaacaaag acttaagtcaagatagcgatctggaatcattacatatnttttttgctgcttcatgtataacccaaaaaattggaccgaaa acagttttgcacattgatgcagttttccgtccactttttcgggtgattcctgcatcaacatttcatttctga |
|
Protein
| Protein ID | pfu_aug1.0_5434.1_01988.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5434.1_01988.t1 EAVKTLNTLQSNAQTIEKMRKERDKKSHLNIPKMIKYAQRTGVTLDDIDNLNVIHVSGTKGKGSTCAFCESILRHHGYKT GFFSSPHLVEVRERFRINGQPISRSMFADYFWEVYSKLIGSKDAEESGGMPAYFAFLTVMAFNMFKQEKVDVAIIEVGIG GQYDSTNLIRKPVVCGVTSLGLDHVSILGETVEKIAWHKAGIFKPGVPAFSSPQHEGAMKVLQDRANEIGNRLDVVSPLA ERDQDGNKLRLGICGHVQQHNAALAVQLCKTFMRTRRKSTTQEESETDQTKNKDLSQDSDLESLHXFFAASCITQKIGPK TVLHIDAVFRPLFRVIPASTFHF |
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