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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5436.1_01991
Locus scaffold5436.1 : 21154 ... 31845 : -
To GenomeBrowser scaffold5436.1:21154..31845
Genes list of scaffold scaffold5436.1
Synonym pfu_aug2.0_447.1_24037

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5436.1_01991.t1 1 1 Mei4 14 113 1.4e-08 34.1 2.4e-12 1.8e-08 33.7

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_5436.1_01991.t1
Definition-
>pfu_aug1.0_5436.1_01991.t1
atgagacaaaccctggttggagcgtgcagcgagatttcccattccattcttctgtgtagtgtcatgagaccgttgttgga
caaagtagaaatgttttcagaacatttacgacaagtttctcagaatggagtatgtttggatgtggacttgtacgatagaa
tgccgtccctgtttaacttgggagagactatattcctcggcttacagaaaaataaccaagctaaagaggaggacttcctc
gaggaaatctattcaagattagataactcacttctatatgtatctgataaattcccattgtatgctcatgctatttggaa
attgcaaggaatgatggagcattgttcaccaaggttaagatga

Protein
Protein IDpfu_aug1.0_5436.1_01991.t1
Definition-
>pfu_aug1.0_5436.1_01991.t1
MRQTLVGACSEISHSILLCSVMRPLLDKVEMFSEHLRQVSQNGVCLDVDLYDRMPSLFNLGETIFLGLQKNNQAKEEDFL
EEIYSRLDNSLLYVSDKFPLYAHAIWKLQGMMEHCSPRLR

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