Gene
| Gene Model ID | pfu_aug1.0_5443.1_38155 |
|---|---|
| Locus | scaffold5443.1 : 11436 ... 26000 : + |
| To GenomeBrowser | scaffold5443.1:11436..26000 |
| Genes list of scaffold | scaffold5443.1 |
| Synonym | pfu_aug2.0_181.1_03759 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5443.1_38155.t1 | 6 | 1 | zf-Di19 | 593 | 618 | 9.0e-08 | 32.1 | 2.6e-05 | 0.039 | 14.0 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 1 | zf-H2C2_2 | 593 | 602 | 1.5e-36 | 122.8 | 0.0023 | 3.4 | 8.1 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 1 | zf-C2H2_4 | 594 | 602 | 7.1e-13 | 47.9 | 0.2 | 290.0 | 2.1 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 1 | zf-C2H2 | 595 | 610 | 3.0e-21 | 74.3 | 0.047 | 70.0 | 4.0 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 2 | zf-H2C2_2 | 605 | 656 | 1.5e-36 | 122.8 | 0.00019 | 0.28 | 11.5 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 2 | zf-C2H2_4 | 646 | 664 | 7.1e-13 | 47.9 | 0.0018 | 2.6 | 8.5 |
| pfu_aug1.0_5443.1_38155.t1 | 6 | 2 | zf-Di19 | 646 | 693 | 9.0e-08 | 32.1 | 1.0e-05 | 0.015 | 15.4 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 2 | zf-C2H2 | 647 | 664 | 3.0e-21 | 74.3 | 0.0041 | 6.0 | 7.4 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 3 | zf-H2C2_2 | 656 | 678 | 1.5e-36 | 122.8 | 7.0e-06 | 0.01 | 16.0 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 3 | zf-C2H2 | 672 | 693 | 3.0e-21 | 74.3 | 0.0016 | 2.4 | 8.6 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 3 | zf-C2H2_4 | 672 | 693 | 7.1e-13 | 47.9 | 0.0036 | 5.4 | 7.5 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 4 | zf-H2C2_2 | 686 | 707 | 1.5e-36 | 122.8 | 9.3e-10 | 1.4e-06 | 28.3 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 4 | zf-C2H2 | 699 | 722 | 3.0e-21 | 74.3 | 8.3e-05 | 0.12 | 12.7 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 4 | zf-C2H2_4 | 699 | 720 | 7.1e-13 | 47.9 | 0.0052 | 7.7 | 7.1 |
| pfu_aug1.0_5443.1_38155.t1 | 6 | 3 | zf-Di19 | 699 | 746 | 9.0e-08 | 32.1 | 0.00013 | 0.19 | 11.8 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 5 | zf-H2C2_2 | 713 | 739 | 1.5e-36 | 122.8 | 0.0015 | 2.3 | 8.6 |
| pfu_aug1.0_5443.1_38155.t1 | 6 | 4 | zf-Di19 | 727 | 783 | 9.0e-08 | 32.1 | 0.0027 | 4.0 | 7.6 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 5 | zf-C2H2 | 728 | 751 | 3.0e-21 | 74.3 | 0.0013 | 1.9 | 9.0 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 5 | zf-C2H2_4 | 728 | 751 | 7.1e-13 | 47.9 | 0.095 | 140.0 | 3.1 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 6 | zf-H2C2_2 | 746 | 772 | 1.5e-36 | 122.8 | 0.00038 | 0.56 | 10.5 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 6 | zf-C2H2 | 762 | 784 | 3.0e-21 | 74.3 | 3.2e-06 | 0.0047 | 17.1 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 6 | zf-C2H2_4 | 762 | 784 | 7.1e-13 | 47.9 | 1.5e-06 | 0.0023 | 18.1 |
| pfu_aug1.0_5443.1_38155.t1 | 6 | 5 | zf-Di19 | 762 | 813 | 9.0e-08 | 32.1 | 0.078 | 120.0 | 2.9 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 7 | zf-H2C2_2 | 778 | 801 | 1.5e-36 | 122.8 | 7.2e-09 | 1.1e-05 | 25.4 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 7 | zf-C2H2 | 790 | 813 | 3.0e-21 | 74.3 | 6.1e-09 | 9.1e-06 | 25.7 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 7 | zf-C2H2_4 | 790 | 813 | 7.1e-13 | 47.9 | 7.7e-05 | 0.11 | 12.8 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 8 | zf-H2C2_2 | 804 | 830 | 1.5e-36 | 122.8 | 4.0e-07 | 0.0006 | 19.9 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 8 | zf-C2H2 | 819 | 842 | 3.0e-21 | 74.3 | 2.1e-06 | 0.0031 | 17.7 |
| pfu_aug1.0_5443.1_38155.t1 | 8 | 8 | zf-C2H2_4 | 819 | 842 | 7.1e-13 | 47.9 | 0.00028 | 0.42 | 11.0 |
| pfu_aug1.0_5443.1_38155.t1 | 6 | 6 | zf-Di19 | 819 | 844 | 9.0e-08 | 32.1 | 0.037 | 55.0 | 3.9 |
Transcript
| Transcript ID | pfu_aug1.0_5443.1_38155.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5443.1_38155.t1 atggcggaccctggccagacagatcagggcgctggggatatgtctgcttccaaaccagtacagcagcttgttgtacccgg ggacatgcaggttaccatggatacagttgccatggcggatagcatggtctatgcagagcagccagctcaatttgagccaa atggagttacaaccacaggaattccagattccatgtatgttgacagcagcggcacagacttggctggcaatcaagacgta atggatcttatacagaatgcagccaacctggctagtgtgacgcaacaaagccaaattatttcacaagatcaagtccaagg aatgctgcctgctgggaatggaatcaatcagacacaaactatgcttacagttcagcagcctgttacggaggtacccatcg tccccgagacttacatacaactcggggacaatctagtggagagtactggtcaaggtcctgagatgaccactcctgctgac cagagcaccggtcaagtggccatgatgaccacaccacaggatcagccacagcagccagtggttgaggaaatgatacaagc tgaaacatacattccactagaagaaaacaaagatgtgcagtcagaagctcagcctattttagttcaaggagttacaaatc cgacccaaggagaggaaggggagggtcctatatccgtgccccaggaggaggaagcaccctcagacgttctcagacaaaca gaatctatggttcagcaatcgctacagcaagctgaggcatcgctaaaaaatgctagccaggaaatggatgaggtggagga aatgctaaaatgggggtcggagggcggagagcaggaaagagaggagcagggaggggtgggaggagctgtagaggagccta gccatgtagatgaggaggttcaggcagaaaatggtcaggaacaaggcaaaggacgccctaggaagtctgtagaggttgtc aaggacaacatagatgatgatgacgatgatgaggaagaagatgatgatgaagatgacaaggaggttgaagaggtagtggt ggatccagaaccggtgaaaagaaaacgtggacgaccaagcaagggcagtgatagtacaccttcaaaagtaggcaaaggcg cacctaaaaagcggacaccagcagttagtgctacgataggcaggaagcgtgatcgtgatgtaaatgatgatgatgaagga agccccacccctgattctgagggtggggccactccatctgccacacctgctaagaaggctcgaggtcaagctggaacatc gtcagggcctcaggaagtaacactggtacaggtggcaggaccaagcgctactgttactactgccacccaaggcactatgt cagcaggatcgcaagcttcaggtccggctcctaaagtcaagactgagccccaggaggctgtcaaacagaagcccatgccc gagcctgtagcccactcctacaataaagatatctatgatatctctcaccttgactttgatgcccagcctggaccatctca atctacagaaggtactcagacaatgccatttgtagaggttgaactgatcgaggaatctgccggcaaaagatcggtgctga ctcagaccgaccccgccctaaaaaagaaaaagtttggtcccctgggtcaggatatgggtgtcggcatggatgaggagcct gaatctccacggaaacggaggaggaaggatgatgatgtgggtctctttgaggagctggaaacaaagaggaggagtgtgag gaatacggaggaggcattgaactgtcctttttgtgacaaggcttttataggactagtaaaacacataaagggaaagcaca aagatgagacagactatgaggaagagatgagaaatgcgaaatggagggaaaagatcatgaaagtgtcaacccagggggtg gatgatgagggggagccgtgtccagagtgcggaaaggtcgcaaagaaccttaaacggcacatggagctccatcagcaaaa cagaatgcagataccatgccctatatgtggcaaggttgttctgaagactggtatgagttcgcacatgagaacagtacact ctggacggaagccgtataaatgtccccactgtgactatgcctcggccttcagaggaaatctcaatacccatctcaaaggg atgcatcttcacacacgtcagtacctgtgtaacacatgtaaagctgctttcaaaaccctcggagctttgattggccacac caaacgtgttcacgaaggctggaaatcgcccaatcagaaaatcttcatttgttccgtatgtgagaaaagattcacaaaga aataccacgttgatcgacacatgttgattcacacgggagagaagccacacaaatgtggtgactgtggacgatgcttcaat aataaatcaaatctcatgtctcatatacagctcgtacataagaagttagccccataccagtgtgatatgtgtcatgagac gtttaagaggaagaagttactcctggagcatataggtagaatccatgtgacggcaggcgaggcagcccaggccatagtga ggaagtttgaggtgatagatgaggatgaggaggaagggctgatcaaagaggactcagatgaggaagggatggagcctgga ccattagagccaggacagacttacgttactgtacagagtgatggtggttatactaccgcagtcgtctctgatccagctca gctattggcaggacaagctctcaccactctacaggtatag |
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Protein
| Protein ID | pfu_aug1.0_5443.1_38155.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5443.1_38155.t1 MADPGQTDQGAGDMSASKPVQQLVVPGDMQVTMDTVAMADSMVYAEQPAQFEPNGVTTTGIPDSMYVDSSGTDLAGNQDV MDLIQNAANLASVTQQSQIISQDQVQGMLPAGNGINQTQTMLTVQQPVTEVPIVPETYIQLGDNLVESTGQGPEMTTPAD QSTGQVAMMTTPQDQPQQPVVEEMIQAETYIPLEENKDVQSEAQPILVQGVTNPTQGEEGEGPISVPQEEEAPSDVLRQT ESMVQQSLQQAEASLKNASQEMDEVEEMLKWGSEGGEQEREEQGGVGGAVEEPSHVDEEVQAENGQEQGKGRPRKSVEVV KDNIDDDDDDEEEDDDEDDKEVEEVVVDPEPVKRKRGRPSKGSDSTPSKVGKGAPKKRTPAVSATIGRKRDRDVNDDDEG SPTPDSEGGATPSATPAKKARGQAGTSSGPQEVTLVQVAGPSATVTTATQGTMSAGSQASGPAPKVKTEPQEAVKQKPMP EPVAHSYNKDIYDISHLDFDAQPGPSQSTEGTQTMPFVEVELIEESAGKRSVLTQTDPALKKKKFGPLGQDMGVGMDEEP ESPRKRRRKDDDVGLFEELETKRRSVRNTEEALNCPFCDKAFIGLVKHIKGKHKDETDYEEEMRNAKWREKIMKVSTQGV DDEGEPCPECGKVAKNLKRHMELHQQNRMQIPCPICGKVVLKTGMSSHMRTVHSGRKPYKCPHCDYASAFRGNLNTHLKG MHLHTRQYLCNTCKAAFKTLGALIGHTKRVHEGWKSPNQKIFICSVCEKRFTKKYHVDRHMLIHTGEKPHKCGDCGRCFN NKSNLMSHIQLVHKKLAPYQCDMCHETFKRKKLLLEHIGRIHVTAGEAAQAIVRKFEVIDEDEEEGLIKEDSDEEGMEPG PLEPGQTYVTVQSDGGYTTAVVSDPAQLLAGQALTTLQV |
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