Gene
| Gene Model ID | pfu_aug1.0_5444.1_52539 |
|---|---|
| Locus | scaffold5444.1 : 252 ... 21655 : - |
| To GenomeBrowser | scaffold5444.1:252..21655 |
| Genes list of scaffold | scaffold5444.1 |
| Synonym | pfu_aug2.0_740.1_01089 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5444.1_52539.t1 | 1 | 1 | Dna2 | 647 | 834 | 0.0 | 194.4 | 0.0 | 0.0 | 194.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5444.1_52539.t1 | gi|109732330|gb|AAI15717.1| | Dna2 protein [Mus musculus] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug1.0_5444.1_52539.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5444.1_52539.t1 atgggcaaactcaaaaagaaatcaccagcaaagcaggaggatggccagaagaaaatatccagtttctttcagaaaggcgg tacaaaaccagtttctagttctctttttaccactactggaaactctaacagtaatggtggatccaaactgacgctgaaga aacctactaatggtaaaactaggtacacagaaactaaagagagggacaaagacatcagctgtaaacaggtgaacagcggg aaaaatgcagatgttcaagcagatgactccagatcagaaccaattgtgatcccagaaactcagtgcttcaagagtcctct taatcctagaccctgtgataagagtgtcagcgaggaccttaacgatagtattattattcccggaactcctgaggagacaa ataagatagacggagcgaaaggaaggaagtgtttttccaggagctttctgacctctgcctctagcgttacgcaacgacct gggaaacatgttgcgaaagaacagttaaagaaagtttcgcaggctagaaaaagtttactgtcggtttctgtgaagttcga ccaaagtagcgtgaaagatgagatttaccatggtagtgagaaaggtgcaagcggaaaccgagtgaagtcttgtctgcaag gagaacctccagtgataggagatgaaaatatcatacacactttggtctcaaactttgaggaaaataatgaaagtcaatca gatattgaaaacatggaatcgcctgaggtagtagaaagcgagaaaattggaaatacttgccaaagcatagatcatgctgc ttcaaatggtgatgtccattcttttacgattaggaaatatgatgaaggaaaattttcggatgaaaaagagaatatacatg tagacctggaaaaggcaacaccgacaaaaatttacgatggtaagtgtatgaaaagaatgtcaaagactggcacatcccca aatagtaagagaagtctgagtacagattgcaaaaaccatgaaatggaaaaagatggcaatgacagtgactcgtctggatt cgaactttcgtttgacgaggatgataaggaagaaactgagagtaaaaataagaaaaagatggatgaagttgaaggcgcta gacgtagtcttaaggaatttgaaaagaaaacgagaaagacgaaaataagaccgaatgcttctgcagttaataattatcag ttgacgatgcatagacctaatgtaagaaaaagtgtcgttgagacaaaagacgatgaactattgagtgaattactggggga gatggacacttcgacaaatcggggatctgcggagaaaaggcctggtgctataaataggcgaaaatccttgaataaaacaa agtctgtaggtgatgtgaaaactggccttacggttggaattacggacgatgaaaagaaatattttgagtgcttagataca gaaattcataatgacatgacgcagctagataaaaaagatacaacatcgagtgatggtaccgtcttgcctaccaaacctgt gatattgaaaaaatctttcaaaaataattctctgaaatttgagaggacgaattcagttgcaagtgcgagttcatcagata taatgaggaacgttcagaaacattcgggtatgcgtttaaatgacatagaggattctgaaatagacgattcagtaactcaa aatacaagttccgataaaggtgtcgtgaaaccctcacagaacatagcggatttcccatcacaggaaggatgtaagccgag aggaacctctgcagtggacattgaggaatttcaatctcagatggaggctgacctattagcagattccttcacgatgtcac caggaaaatctactagtacagacagcatgggagtttgtaatgtggcaccttgtgttaactttggtcgccatgtagtgacg gcagtgaacactctacagtctgatacccatgtgtttgagggtgacattgtccatatcctggctaattttgatcaagatgg agtctgtaatattgatgacaaggagggactcatcattgtgaaccctgacctcttgttgtcagggacaacggttgtgtcca gtgttttctgtatgagaaagtccgtcttgaatgaaaaatttaagggtattgacaagggtaacgtacagatgttgtacggc agtataattcatcaagtcttccagcaggttttgaggaaacagattttcgaagaagataagatcttaaaagaagcagaaga cactgtaaaacaactcaaatttctacatgatatgtacggaagtaatgttatagagagtgaagttttagaagagatcaaaa agtacatccctcccctacagaaatggttacaacagtacactaccatcggcaagaatatcctaggggctcagaggaaggct gacagtgacatcgcaatactcaaggtcaaggacattgaggagaatatctggtcgccaagatatggggtaaaaggaaaaat agatttaacagtggaggtcaaggtcacattatacagtatgatgagttcagataggagagaagacccaggtcaaggtcttt tactttatctaaaagaacctgacatgaaggtcatatcagctgatcacctcaataagagagttagaaagcacaaaatgtcc gagtcaacatcttttggcgttgtttttcattatgacgtcactgttaaaagacgcaattccattgtgacgtaa |
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Protein
| Protein ID | pfu_aug1.0_5444.1_52539.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5444.1_52539.t1 MGKLKKKSPAKQEDGQKKISSFFQKGGTKPVSSSLFTTTGNSNSNGGSKLTLKKPTNGKTRYTETKERDKDISCKQVNSG KNADVQADDSRSEPIVIPETQCFKSPLNPRPCDKSVSEDLNDSIIIPGTPEETNKIDGAKGRKCFSRSFLTSASSVTQRP GKHVAKEQLKKVSQARKSLLSVSVKFDQSSVKDEIYHGSEKGASGNRVKSCLQGEPPVIGDENIIHTLVSNFEENNESQS DIENMESPEVVESEKIGNTCQSIDHAASNGDVHSFTIRKYDEGKFSDEKENIHVDLEKATPTKIYDGKCMKRMSKTGTSP NSKRSLSTDCKNHEMEKDGNDSDSSGFELSFDEDDKEETESKNKKKMDEVEGARRSLKEFEKKTRKTKIRPNASAVNNYQ LTMHRPNVRKSVVETKDDELLSELLGEMDTSTNRGSAEKRPGAINRRKSLNKTKSVGDVKTGLTVGITDDEKKYFECLDT EIHNDMTQLDKKDTTSSDGTVLPTKPVILKKSFKNNSLKFERTNSVASASSSDIMRNVQKHSGMRLNDIEDSEIDDSVTQ NTSSDKGVVKPSQNIADFPSQEGCKPRGTSAVDIEEFQSQMEADLLADSFTMSPGKSTSTDSMGVCNVAPCVNFGRHVVT AVNTLQSDTHVFEGDIVHILANFDQDGVCNIDDKEGLIIVNPDLLLSGTTVVSSVFCMRKSVLNEKFKGIDKGNVQMLYG SIIHQVFQQVLRKQIFEEDKILKEAEDTVKQLKFLHDMYGSNVIESEVLEEIKKYIPPLQKWLQQYTTIGKNILGAQRKA DSDIAILKVKDIEENIWSPRYGVKGKIDLTVEVKVTLYSMMSSDRREDPGQGLLLYLKEPDMKVISADHLNKRVRKHKMS ESTSFGVVFHYDVTVKRRNSIVT |
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