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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5465.1_52545
Locus scaffold5465.1 : 1 ... 9108 : +
To GenomeBrowser scaffold5465.1:1..9108
Genes list of scaffold scaffold5465.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5465.1_52545.t1 gi|291234700|ref|XP_002737286.1| PREDICTED: DNA topoisomerase 2-beta [Saccoglossus kowalevskii] 2.0e-15

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_5465.1_52545.t1
Definition-
>pfu_aug1.0_5465.1_52545.t1
cgtcaggagctagaaatattgaagaagaaatctccagaggacttgtggctggaagatttggaccaattcatggctttatt
agaggaaacggagcagcaggagagagaagatgataacgccaatatgaacaagacggccaagatcaagggcaaggtcaaat
ctaggaagatcctcgcccaggagactatgccgtcacctgttggtaggagggtcgtaccgcgagtcgacacggcaatgagg
cagaaagcggagcaagctcagaaaaaaatcaacaaggacaaaataaagaaagaagggaagaatcttctcgatttctttgg
taaagaagaaccagaggacgatccagaacccatgagtttggctgatcgactgaaggaaaaaacaggaattacctccccta
ctgccatttctaaagtggtcagtaatggtgatgctaaacctgaggagaaaaagaagcgagccaagaaaataaactatagt
ttcaactcggatgatgaggaggcagtgcagtcagatagtgataacaatgacttccagccgacaaactttgatgagataaa
tagcgggccggcccagatctccgatgctggcagtgatattgactcccctgttaaaactgtaccaaagaaagctgcaaagt
cggctatagaattcattccatcctcagatgacgaggaaaaggaatctcaagaatctgataaactatcctggctatctccg
gctaaagagaaaccagaagttactgcaataagtgatgatgacatggacgacatgtttcctaaaaccacaaaaccggccaa
ggaaaaaccggcagcaaaaccagccaagaaaccggcagcaaaaagagcaccagccaaaaaagaaaaagcaccgggagaga
aaaagccggcaaaacccaaatctaaagctgttaagcgacctgccaagaagattgacagtgaccttgacctttcagatgat
gagttcgcaccaaaaaagagagctacaaagaagaagaaatcggcaggcagtgatgatgatagttttggatttggtggtga
cgatggagacgaaggcatctcaatacccgcagaaccgagacgtggcgggggacgttctagggctcctgtcaagtataact
ttgacgatgatgatgacgacgatgatgatgacttttaa

Protein
Protein IDpfu_aug1.0_5465.1_52545.t1
Definition-
>pfu_aug1.0_5465.1_52545.t1
RQELEILKKKSPEDLWLEDLDQFMALLEETEQQEREDDNANMNKTAKIKGKVKSRKILAQETMPSPVGRRVVPRVDTAMR
QKAEQAQKKINKDKIKKEGKNLLDFFGKEEPEDDPEPMSLADRLKEKTGITSPTAISKVVSNGDAKPEEKKKRAKKINYS
FNSDDEEAVQSDSDNNDFQPTNFDEINSGPAQISDAGSDIDSPVKTVPKKAAKSAIEFIPSSDDEEKESQESDKLSWLSP
AKEKPEVTAISDDDMDDMFPKTTKPAKEKPAAKPAKKPAAKRAPAKKEKAPGEKKPAKPKSKAVKRPAKKIDSDLDLSDD
EFAPKKRATKKKKSAGSDDDSFGFGGDDGDEGISIPAEPRRGGGRSRAPVKYNFDDDDDDDDDDF

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