Gene
| Gene Model ID | pfu_aug1.0_547.1_00378 |
|---|---|
| Locus | scaffold547.1 : 23463 ... 36025 : - |
| To GenomeBrowser | scaffold547.1:23463..36025 |
| Genes list of scaffold | scaffold547.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_547.1_00378.t1 | 2 | 1 | KTI12 | 1 | 184 | 0.0 | 409.7 | 0.0 | 0.0 | 241.6 |
| pfu_aug1.0_547.1_00378.t1 | 2 | 1 | AAA_33 | 3 | 142 | 3.8e-08 | 33.3 | 2.3e-10 | 3.9e-07 | 30.0 |
| pfu_aug1.0_547.1_00378.t1 | 2 | 2 | AAA_33 | 182 | 222 | 3.8e-08 | 33.3 | 0.26 | 430.0 | 0.7 |
| pfu_aug1.0_547.1_00378.t1 | 2 | 2 | KTI12 | 185 | 351 | 0.0 | 409.7 | 0.0 | 0.0 | 170.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_547.1_00378.t1 | gi|354468184|ref|XP_003496547.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_547.1_00378.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_547.1_00378.t1 atgccacttgtcattatttgtggttttccctcaagtggaaaatcacgaagatctgaggaactgaaaaaataccttcagga agaactgaagaaaacagtacatataatcagtgatacctctataggaattgacaaaaatgatgtctattcagactcaaaga aagagaaagatgtcagagcaaatttgaaatcttcaactcaaaggctattgaataaggatgaagtagtaattctagattca ttaaactacataaaaggttttagatatgagttatactgtgttactaagtcctgtaaaacccctcattgtgtaatattctg tgatattaataaggagaaggcacatcagtttaatgatagcagacaagaatcggaacagtaccataaagatatattagatg gtcttatgatgcgttttgaagagcccaatcctaaccagagatgggacagtcctttatttgtgatacaagttgaagatcaa cttccactagaacagatttctgatgcactgttccacaggaaacccccaccaccaaatatggcaactcaaaatatattctg tgatataagtaaggagaaggcacatcagtttaatgatagcagacaagaatcggagcagtaccataaagatatattagatg gtcttatgatgcgttttgaagagcccaatcctaaccagagatgggatagtcctttatttgtgatacaagttgaagaccaa cttccactagaacaggtttctgatgcactgttccacaggaaacccccaccaccaaatatggcaactcaaaatcaaccact ttcttcaacaaatttcctttatgagttggataaagtcactcaagacgctgtatctacaataatggactcacagaaaactt gtattccaggagatgtaatcacagtcaaaggatctacagaaaaattttttgtaacaaggcctgtaactcttgctgagctt cagagacacagacgtcagtttataacttataccaaaatgcatcctgtggaagacttgactaaaattcctaatatgtttat tcaatatttaaataattctttgacatga |
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Protein
| Protein ID | pfu_aug1.0_547.1_00378.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_547.1_00378.t1 MPLVIICGFPSSGKSRRSEELKKYLQEELKKTVHIISDTSIGIDKNDVYSDSKKEKDVRANLKSSTQRLLNKDEVVILDS LNYIKGFRYELYCVTKSCKTPHCVIFCDINKEKAHQFNDSRQESEQYHKDILDGLMMRFEEPNPNQRWDSPLFVIQVEDQ LPLEQISDALFHRKPPPPNMATQNIFCDISKEKAHQFNDSRQESEQYHKDILDGLMMRFEEPNPNQRWDSPLFVIQVEDQ LPLEQVSDALFHRKPPPPNMATQNQPLSSTNFLYELDKVTQDAVSTIMDSQKTCIPGDVITVKGSTEKFFVTRPVTLAEL QRHRRQFITYTKMHPVEDLTKIPNMFIQYLNNSLT |
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