Gene
| Gene Model ID | pfu_aug1.0_547.1_00379 |
|---|---|
| Locus | scaffold547.1 : 41874 ... 57475 : - |
| To GenomeBrowser | scaffold547.1:41874..57475 |
| Genes list of scaffold | scaffold547.1 |
| Synonym | pfu_aug2.0_360.1_00657 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_547.1_00379.t1 | 2 | 1 | EGF_CA | 194 | 225 | 4.3e-08 | 33.0 | 6.3e-06 | 0.019 | 14.9 |
| pfu_aug1.0_547.1_00379.t1 | 2 | 2 | EGF_CA | 254 | 294 | 4.3e-08 | 33.0 | 4.1e-11 | 1.2e-07 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_547.1_00379.t1 | gi|348515135|ref|XP_003445095.1| | PREDICTED: cysteine-rich with EGF-like domain protein 2-like isoform X1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_547.1_00379.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_547.1_00379.t1 atgagttattacttcagctattcaatttcagtaaattattatggtttgaaaatacataggaaattcaagccagttctacc aatccgtactgaagtcgtagctatccttgtgcgaaacgtggctatccgtactcgagttgtgtgtcatacatttgtcgagg agcatgaggagttgatagagaaattttggttcagcacatttgccaaaagtaaaggagaagataaaaacttttttgcctgg ttatgtatagaaaatgtgaaagtttgttgtccaagtaatacatacggaccatcgtgcaagccttgtcctggaggaactaa gagaccatgtaatgataatggcaaatgtgatggagaggggaccagaggtggtaagggtacctgctcatgtaattcaggct accaaggctcactctgtgataattgttctgatggacactttgaagaagtcaaaaatgaaactcacactatttgcaaagct tgccatagatcatgtaaatccacatgttgggaggagggcccaaaaggctgtgatgagtgtaaggagggatggatacagtc tgaggaagagggctgtaaggatatgaatgaatgtgaaagggagacaaacccatgtagtgaagatcagtattgtggcaata atgaggggtcatattactgtgctaaatgtcatttagcttgtaaaggatgtacgcagtatggagtggaaaaatgtaaagag tgtgcagagggctatcagctagtaggatccgcctgtacagatattgatgaatgccagtctgaccctaatccctgtacagg acaacataggaaatgtgtcaataatcacgggggatactcgtgtgattgtatagagggctttattgagggagagggagaat gtataccaaaacctaaagctttgaaagtcgcacacgtaccttcaaaacttgacaagaatcaaagtattgatattctaatc agagattaa |
|
Protein
| Protein ID | pfu_aug1.0_547.1_00379.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_547.1_00379.t1 MSYYFSYSISVNYYGLKIHRKFKPVLPIRTEVVAILVRNVAIRTRVVCHTFVEEHEELIEKFWFSTFAKSKGEDKNFFAW LCIENVKVCCPSNTYGPSCKPCPGGTKRPCNDNGKCDGEGTRGGKGTCSCNSGYQGSLCDNCSDGHFEEVKNETHTICKA CHRSCKSTCWEEGPKGCDECKEGWIQSEEEGCKDMNECERETNPCSEDQYCGNNEGSYYCAKCHLACKGCTQYGVEKCKE CAEGYQLVGSACTDIDECQSDPNPCTGQHRKCVNNHGGYSCDCIEGFIEGEGECIPKPKALKVAHVPSKLDKNQSIDILI RD |
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